RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ZNF595Q8IYB9 648 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 AGBL5Q8NDL9 886 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 OR2A1Q8NGT9 310 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 SGTBQ96EQ0 304 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 POLDIP3Q9BY77 421 aaKnown RBP12.87□□□□□ -0.35
DDX54-202ENST00000314045 GRHPRQ9UBQ7 328 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 CLEC4AQ9UMR7 237 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 NPIPA1Q9UND3 350 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 MED16Q9Y2X0 877 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 UNC119BA6NIH7 251 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 LOC110117498-PIK3R3F6TDL0 507 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 SNX4O95219 450 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 APOL3O95236 402 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 OR1D5P58170 312 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 HOXC5Q00444 222 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 SNTA1Q13424 505 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 PRR22Q8IZ63 422 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 MS4A6EQ96DS6 147 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 SLC41A3Q96GZ6 507 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 ZNF559Q9BR84 538 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 SEC61A2Q9H9S3 476 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
DDX54-202ENST00000314045 SNTG1Q9NSN8 517 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 AHCTF1Q8WYP5 2266 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 ZNF638Q14966 1978 aaKnown RBP12.86□□□□□ -0.35
DDX54-202ENST00000314045 C11orf98E9PRG8 122 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 LCMT2O60294 686 aaKnown RBP12.86□□□□□ -0.35
DDX54-202ENST00000314045 KCNK5O95279 499 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 GPX2P18283 190 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 PMS2P3Q13401 168 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 DNM1P34Q6PK57 102 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 TSPYL5Q86VY4 417 aaPredicted RBP12.86□□□□□ -0.35
DDX54-202ENST00000314045 ZNF619Q8N2I2 560 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 OR51G2Q8NGK0 314 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 SLC38A5Q8WUX1 472 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 DIO2Q92813 273 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 AMDHD1Q96NU7 426 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 WDR12Q9GZL7 423 aaKnown RBP12.86□□□□□ -0.35
DDX54-202ENST00000314045 KLHL31Q9H511 634 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 ABCB9Q9NP78 766 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 STMN3Q9NZ72 180 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 GAPDHSO14556 408 aaPredicted RBP12.86□□□□□ -0.35
DDX54-202ENST00000314045 CDC40O60508 579 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDX54-202ENST00000314045 GREM1O60565 184 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 MICAQ29983 383 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 DCST2Q5T1A1 773 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 DLEU7Q6UYE1 221 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 RPTNQ6XPR3 784 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 TP53I13Q8NBR0 393 aaPredicted RBP12.86□□□□□ -0.35
DDX54-202ENST00000314045 SMRP1Q8NCR6 262 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 BORCS5Q969J3 196 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 TMEM80Q96HE8 168 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 ADAD1Q96M93 576 aaKnown RBP12.86□□□□□ -0.35
DDX54-202ENST00000314045 ITPAQ9BY32 194 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 NANSQ9NR45 359 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 PRAMEF33A0A0G2JMD5 474 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 SPTY2D1-AS1A0A0U1RR47 76 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 VILLO15195 856 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 RNF13O43567 381 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 CD2P06729 351 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 RCVRNP35243 200 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 CHRNEQ04844 493 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 MESP2Q0VG99 397 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 PUM1Q14671 1186 aaKnown RBP eCLIP12.86□□□□□ -0.352e-8■■■□□ 17.3
DDX54-202ENST00000314045 LTB4RQ15722 352 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 TSTQ16762 297 aaKnown RBP12.86□□□□□ -0.35
DDX54-202ENST00000314045 ZSWIM7Q19AV6 140 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 SLC48A1Q6P1K1 146 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 TSSK4Q6SA08 328 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 DIRAS2Q96HU8 199 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 ADOQ96SZ5 270 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 COMMD4Q9H0A8 199 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 WNT16Q9UBV4 365 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 CD300AQ9UGN4 299 aa12.86□□□□□ -0.35
DDX54-202ENST00000314045 TSFMP43897 325 aaKnown RBP12.85□□□□□ -0.35
DDX54-202ENST00000314045 MADCAM1Q13477 382 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ZNF750Q32MQ0 723 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 Q7L0L9 218 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 TMEM151AQ8N4L1 468 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ZNF676Q8N7Q3 588 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ABHD11Q8NFV4 315 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 OR6N1Q8NGY5 312 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 WDR20Q8TBZ3 569 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 PIK3R3Q92569 461 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 FKBP10Q96AY3 582 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 FAM46AQ96IP4 442 aaKnown RBP12.85□□□□□ -0.35
DDX54-202ENST00000314045 RBP7Q96R05 134 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
DDX54-202ENST00000314045 PTRH2Q9Y3E5 179 aaKnown RBP12.85□□□□□ -0.35
DDX54-202ENST00000314045 J3QLW9 94 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 K7EQS6 105 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 PLD2O14939 933 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 MAGEB3O15480 346 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 TACSTD2P09758 323 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 GKN3PP0CG01 181 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ADORA3P0DMS8 318 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 ZNF19P17023 458 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 TEAD1P28347 426 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 CNR2P34972 360 aa12.85□□□□□ -0.35
DDX54-202ENST00000314045 FAM131AQ6UXB0 335 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms