RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NUDT8Q8WV74 236 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FAR1Q8WVX9 515 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SLC9A6Q92581 669 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DIO2Q92813 273 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TMBIM1Q969X1 311 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FAM120BQ96EK7 910 aaKnown RBP10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SLC35G5Q96KT7 338 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FRMD6Q96NE9 622 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OR52E6Q96RD3 313 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FAM173AQ9BQD7 235 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 LMF2Q9BU23 707 aaKnown RBP10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CXorf36Q9H7Y0 433 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RMND5AQ9H871 391 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 METTL7AQ9H8H3 244 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SDR39U1Q9NRG7 319 aaPredicted RBP10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SIRT3Q9NTG7 399 aaPredicted RBP10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CBLCQ9ULV8 474 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FAF1Q9UNN5 650 aaPredicted RBP10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GPR55Q9Y2T6 319 aaPredicted RBP10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NCKAP5O14513 1909 aa10.13□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PRSS51A0A1B0GVH4 220 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ASPDHA6ND91 283 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 C9JVG2 144 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 G3V3Y1 287 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 J3QKU1 62 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NME6O75414 186 aaPredicted RBP10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ALOX5P09917 674 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CT45A8P0DMV1 189 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CT45A9P0DMV2 189 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NCF2P19878 526 aaPredicted RBP10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CNR1P21554 472 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GABRA3P34903 492 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RFX3P48380 749 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 MASP1P48740 699 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ATP4BP51164 291 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 POLR2JP52435 117 aaKnown RBP10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 KCNK10P57789 538 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PSG6Q00889 435 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SQLEQ14534 574 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 LASP1Q14847 261 aaKnown RBP10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DECR1Q16698 335 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CYP27C1Q4G0S4 372 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CT45A2Q5DJT8 189 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 MFSD12Q6NUT3 480 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PAOXQ6QHF9 649 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NPSR1Q6W5P4 371 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NUP54Q7Z3B4 507 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OR2M7Q8NG81 312 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OR5AK3PQ8NH89 298 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RFWD2Q8NHY2 731 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PSMA8Q8TAA3 256 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FBXO30Q8TB52 745 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SPPL2AQ8TCT8 520 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GPR151Q8TDV0 419 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NR4A3Q92570 626 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 MIB2Q96AX9 1013 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TMCO6Q96DC7 493 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TEX37Q96LM6 180 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ZNF597Q96LX8 424 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 COL21A1Q96P44 957 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PANX1Q96RD7 426 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SECISBP2Q96T21 854 aaKnown RBP10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DOHHQ9BU89 302 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TMEM120AQ9BXJ8 343 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 RABEP2Q9H5N1 569 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 KLRF1Q9NZS2 232 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NTMQ9P121 344 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 BOKQ9UMX3 212 aaPredicted RBP10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 NTNG1Q9Y2I2 539 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CHCHD2Q9Y6H1 151 aaPredicted RBP10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FREM3P0C091 2139 aa10.12□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FAM234BA2RU67 622 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OR6C70A6NIJ9 312 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 UGT2B11O75310 529 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SOX30O94993 753 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ANP32DO95626 131 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 HMGN2P05204 90 aaKnown RBP10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 EDN3P14138 238 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 UQCRC2P22695 453 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 IL12AP29459 219 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CHI3L1P36222 383 aaPredicted RBP10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PIGAP37287 484 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DNASE1L1P49184 302 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 MRPL19P49406 292 aaKnown RBP10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 DGKQP52824 942 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ARFIP2P53365 341 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 PNLIPRP2P54317 469 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 WNT3P56703 355 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 FOXK1P85037 733 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 TIGD2Q4W5G0 525 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 CDC73Q6P1J9 531 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ANGPTL8Q6UXH0 198 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 MSANTD1Q6ZTZ1 278 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 WDR53Q7Z5U6 358 aaPredicted RBP10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 SLC22A16Q86VW1 577 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 COX18Q8N8Q8 333 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 GALNT11Q8NCW6 608 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 OR9I1Q8NGQ6 314 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 ADAMTS15Q8TE58 950 aa10.11□□□□□ -0.79
CSPG4P1Y-201ENST00000306641 EFHD2Q96C19 240 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms