RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 TLR4O00206 839 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 ALDH9A1P49189 494 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 RGS19P49795 217 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 RAB8AP61006 207 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 PDZD3Q86UT5 571 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 LRRTM4Q86VH4 590 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 C9orf62Q8N4C0 152 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 ZNF655Q8N720 491 aaPredicted RBP10.31□□□□□ -0.76
LSM3-201ENST00000306024 AQP11Q8NBQ7 271 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 ATG10Q9H0Y0 220 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 RPL36Q9Y3U8 105 aaKnown RBP10.31□□□□□ -0.76
LSM3-201ENST00000306024 PRSS21Q9Y6M0 314 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 TRBV23OR9-2A0A075B6M9 112 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 TEX13CA0A0J9YWL9 993 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 GADD45GO95257 159 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 CNR2P34972 360 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 C18orf21Q32NC0 220 aaPredicted RBP10.3□□□□□ -0.76
LSM3-201ENST00000306024 XKR7Q5GH72 579 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 KIAA1161Q6NSJ0 714 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 MARCH9Q86YJ5 346 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 OR9Q2Q8NGE9 314 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 DNAJB8Q8NHS0 232 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 CREB3L1Q96BA8 519 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 TOE1Q96GM8 510 aaKnown RBP10.3□□□□□ -0.76
LSM3-201ENST00000306024 SPACA7Q96KW9 195 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 ZFP3Q96NJ6 502 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 OR51J1Q9H342 316 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 TVP23BQ9NYZ1 205 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 SLC25A37Q9NYZ2 338 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 CPNE7Q9UBL6 633 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 CRYZQ08257 329 aaKnown RBP10.3□□□□□ -0.76
LSM3-201ENST00000306024 EXOC3L2Q2M3D2 409 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 GAB4Q2WGN9 574 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 IFI44LQ53G44 452 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 CLLU1Q5K131 121 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 RRM2BQ7LG56 351 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 KANSL1Q7Z3B3 1105 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 MEIOBQ8N635 442 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 TMEM145Q8NBT3 493 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 C11orf65Q8NCR3 313 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 UFD1Q92890 307 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 EBPLQ9BY08 206 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 GSDMCQ9BYG8 508 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 MS4A7Q9GZW8 240 aaPredicted RBP10.3□□□□□ -0.76
LSM3-201ENST00000306024 ACTR10Q9NZ32 417 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 NUDT4Q9NZJ9 180 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 NYNRINQ9P2P1 1898 aaKnown RBP10.3□□□□□ -0.76
LSM3-201ENST00000306024 KRBOX1C9JBD0 128 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 EEF1E1O43324 174 aaKnown RBP10.3□□□□□ -0.76
LSM3-201ENST00000306024 PPM1BO75688 479 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 ACSM4P0C7M7 580 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 BCKDHAP12694 445 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 SHEQ5VZ18 495 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 IKBIPQ70UQ0 350 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 SZRD1Q7Z422 152 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 ZFP41Q8N8Y5 198 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 RFT1Q96AA3 541 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 MRGPRX1Q96LB2 322 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 PDCD10Q9BUL8 212 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 POPDC3Q9HBV1 291 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 MBD2Q9UBB5 411 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 REV1Q9UBZ9 1251 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 KCNK6Q9Y257 313 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 PRELID3BQ9Y3B1 194 aa10.3□□□□□ -0.76
LSM3-201ENST00000306024 ARHGEF33A8MVX0 844 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 PDCD5O14737 125 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 RPN2P04844 631 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 TPOP07202 933 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 NDUFV2P19404 249 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 IDSP22304 550 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 FEN1P39748 380 aaKnown RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 KIR2DL1P43626 348 aaPredicted RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 CTSCP53634 463 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 CLDN2P57739 230 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 TCEANCQ8N8B7 351 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 FAM46DQ8NEK8 389 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 CD200R1Q8TD46 325 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 APH1BQ8WW43 257 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 ELMOD3Q96FG2 381 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 SPATA6Q9NWH7 488 aaPredicted RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 SIRT5Q9NXA8 310 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 SERGEFQ9UGK8 458 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 DIMT1Q9UNQ2 313 aaKnown RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 LAMA3Q16787 3333 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 LGALS8O00214 317 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 FFAR2O15552 330 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 SSX5O60225 188 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 ACSL1P33121 698 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 TOR1AIP1Q5JTV8 583 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 CTSL3PQ5NE16 218 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 C11orf88Q6PI97 169 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 C3P1Q6ZMU1 363 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 C2orf73Q8N5S3 287 aaPredicted RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 MAPKAP1Q9BPZ7 522 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 TMED9Q9BVK6 235 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 ZNF436Q9C0F3 470 aaPredicted RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 PLCXD1Q9NUJ7 323 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 TMEM45AQ9NWC5 275 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms