RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SOX1O00570 391 aaPredicted RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 UBFD1O14562 309 aaKnown RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 HSPA12AO43301 675 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 DNAJB6O75190 326 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 MAS1P04201 325 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 EDN1P05305 212 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 POU4F3Q15319 338 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 CATSPEREQ5SY80 951 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 KCTD11Q693B1 232 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 ELP2Q6IA86 826 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 CPOQ8IVL8 374 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 DNAJC22Q8N4W6 341 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 CD99L2Q8TCZ2 262 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 SAMD8Q96LT4 415 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 RANGRFQ9HD47 186 aaPredicted RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 IL26Q9NPH9 171 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 MYH13Q9UKX3 1938 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 LOC102723532A0A0G2JNH3 316 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 FEZF1A0PJY2 475 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 CASC3O15234 703 aaKnown RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 SLC16A8O95907 504 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 ALDOBP05062 364 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 ERCC1P07992 297 aaPredicted RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 GABRB3P28472 473 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 AMZ1Q400G9 498 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 TRNP1Q6NT89 227 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 METAP1DQ6UB28 335 aaPredicted RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 PIANPQ8IYJ0 282 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 LNX2Q8N448 690 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 SPRYD4Q8WW59 207 aaPredicted RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 CIDECQ96AQ7 238 aaPredicted RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 NEDD4LQ96PU5 975 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 PINK1Q9BXM7 581 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 KATNBL1Q9H079 304 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 B8ZZF3 427 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 M0QZQ0 153 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 M0R3H8 397 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 FUCA1P04066 466 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 GALTP07902 379 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 GNMTQ14749 295 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 TEAD2Q15562 447 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 IER5LQ5T953 404 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 HES5Q5TA89 166 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 ERN2Q76MJ5 926 aaKnown RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 CEP68Q76N32 757 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 SCD5Q86SK9 330 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 LRRC28Q86X40 367 aaPredicted RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 RAB7BQ96AH8 199 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 PDLIM5Q96HC4 596 aaKnown RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 SNX18Q96RF0 628 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 RAD9AQ99638 391 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 SRA1Q9HD15 236 aaKnown RBP12.19□□□□□ -0.46
COL3A1-201ENST00000304636 FBXL12Q9NXK8 326 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 CLEC4EQ9ULY5 219 aa12.19□□□□□ -0.46
COL3A1-201ENST00000304636 TCRBV5S1A1TA0A578 114 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 FARS2O95363 451 aaKnown RBP12.18□□□□□ -0.46
COL3A1-201ENST00000304636 H2BFMP0C1H6 154 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 ADRB3P13945 408 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 SOX9P48436 509 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 SERINC5Q86VE9 423 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 SMPDL3BQ92485 455 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 FAM46BQ96A09 425 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 URM1Q9BTM9 101 aaKnown RBP12.18□□□□□ -0.46
COL3A1-201ENST00000304636 ACTRT3Q9BYD9 372 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 MVB12BQ9H7P6 319 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 PELI2Q9HAT8 420 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 INHAP05111 366 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 ADORA3P0DMS8 318 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 DPY19L2P1Q6NXN4 242 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 DLK2Q6UY11 383 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 C3P1Q6ZMU1 363 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 LACC1Q8IV20 430 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
COL3A1-201ENST00000304636 OR2M2Q96R28 347 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 LOC105369274A0A096LPK9 316 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 GABRR3A8MPY1 467 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 A8MU76 341 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 EEF1E1-BLOC1S5C9J1V9 151 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 F8W036 122 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 SLC22A5O76082 557 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 AMY2AP04746 511 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 DAPP51397 102 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 BLOC1S1P78537 153 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 PKDCCQ504Y2 493 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 ARSKQ6UWY0 536 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 OR4N4Q8N0Y3 316 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 ZNF583Q96ND8 569 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 CPPED1Q9BRF8 314 aaPredicted RBP12.18□□□□□ -0.46
COL3A1-201ENST00000304636 GPR62Q9BZJ7 368 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 CCDC86Q9H6F5 360 aaKnown RBP12.18□□□□□ -0.46
COL3A1-201ENST00000304636 PSORS1C1Q9UIG5 152 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 OR6C74A6NCV1 312 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 SPDEFO95238 335 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 GALEQ14376 348 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 PCGF3Q3KNV8 242 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 MLIPQ5VWP3 458 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 MAMDC4Q6UXC1 1216 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 OR4C15Q8NGM1 316 aa12.18□□□□□ -0.46
COL3A1-201ENST00000304636 OR5AK2Q8NH90 309 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms