RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 PSMB10P40306 273 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MC3RP41968 323 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 KANSL1Q7Z3B3 1105 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 COMMD6Q7Z4G1 85 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MFSD6LQ8IWD5 586 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ENDOVQ8N8Q3 282 aaKnown RBP12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SDR9C7Q8NEX9 313 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RHEBL1Q8TAI7 183 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DDIT4LQ96D03 193 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SMIM14Q96QK8 99 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GXYLT2A0PJZ3 443 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 APOC3P02656 99 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CD68P34810 354 aaPredicted RBP12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RORAP35398 523 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ZNF33AQ06730 810 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PIP5KL1Q5T9C9 394 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 C6orf89Q6UWU4 347 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ZNF765Q7L2R6 523 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SLC35F2Q8IXU6 374 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TOR1AIP2Q8NFQ8 470 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR5AK2Q8NH90 309 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR5B2Q96R09 309 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NELFAQ9H3P2 528 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MYH8P13535 1937 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ABCC6O95255 1503 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LAMTOR5O43504 91 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SLC16A8O95907 504 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 P04436 131 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 THEGLP0DJG4 465 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PBX2P40425 430 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RUNX3Q13761 415 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 KIAA0319Q5VV43 1072 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 HHIPQ96QV1 700 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PCTPQ9UKL6 214 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CSNK1G3Q9Y6M4 447 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GPR39O43194 453 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CRTAPO75718 401 aaPredicted RBP12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LATS1O95835 1130 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ERCC1P07992 297 aaPredicted RBP12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 UCHL1P09936 223 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PTPN6P29350 595 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ART1P52961 327 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 S100A12P80511 92 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PLGLAQ15195 96 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SEZ6LQ9BYH1 1024 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ABCG5Q9H222 651 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NMNAT1Q9HAN9 279 aaPredicted RBP12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 EDARQ9UNE0 448 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PIAS3Q9Y6X2 628 aa12.88□□□□□ -0.35
CHRFAM7A-201ENST00000299847 UGT2B10P36537 528 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PITPNBP48739 271 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ACTC1P68032 377 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ACTA1P68133 377 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PIN1Q13526 163 aaPredicted RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SLC18B1Q6NT16 456 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TMEM173Q86WV6 379 aaPredicted RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LIX1LQ8IVB5 337 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 UMODL1-AS1Q8N2C9 162 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TUBA1CQ9BQE3 449 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 URM1Q9BTM9 101 aaKnown RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 VSX1Q9NZR4 365 aaPredicted RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ZNF175Q9Y473 711 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 F5H5K5 113 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 KIAA0355O15063 1070 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 FAM163BP0C2L3 166 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PNMTP11086 282 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GRIA2P42262 883 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ARHGAP11AQ6P4F7 1023 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 IL17RCQ8NAC3 791 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TOMM40LQ969M1 308 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TMIGD2Q96BF3 282 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 C16orf58Q96GQ5 468 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 AP1S3Q96PC3 154 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR4K3Q96R72 315 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RANBP9Q96S59 729 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 B4GALT7Q9UBV7 327 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ACTA2P62736 377 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ACTG2P63267 376 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 FADDQ13158 208 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SNTB2Q13425 540 aaKnown RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GRM7Q14831 915 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PAGE3Q5JUK9 113 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 C10orf62Q5T681 223 aaPredicted RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR52E8Q6IFG1 317 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ZNF783Q6ZMS7 281 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SLC17A9Q9BYT1 436 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 AK6Q9Y3D8 172 aaKnown RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NPIPB15A6NHN6 443 aaPredicted RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 EPOP01588 193 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RAB3BP20337 219 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 AKR1C2P52895 323 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GALNT1Q10472 559 aaPredicted RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ERV3-1Q14264 604 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GARNL3Q5VVW2 1013 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 HACD2Q6Y1H2 254 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SLC15A4Q8N697 577 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 FAIMQ9NVQ4 179 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms