RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 RCBTB2O95199 551 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 CLDN9O95484 217 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 CBX7O95931 251 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 TGM6O95932 706 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 GHRHP01286 108 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 CPN1P15169 458 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 KRT15P19012 456 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 PAFAH1B1P43034 410 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 MAGEA4P43358 317 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 TMED10P49755 219 aaKnown RBP8.42□□□□□ -1.06
CNOT9-202ENST00000295701 ARFIP1P53367 373 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 ALDH18A1P54886 795 aaKnown RBP8.42□□□□□ -1.06
CNOT9-202ENST00000295701 PLTPP55058 493 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 C2orf54Q08AI8 447 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 FAM27E3Q08E93 113 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 MAP4K2Q12851 820 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 ILF2Q12905 390 aaKnown RBP8.42□□□□□ -1.06
CNOT9-202ENST00000295701 CALCOCO2Q13137 446 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 RCAN2Q14206 197 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 TRMT12Q53H54 448 aaKnown RBP8.42□□□□□ -1.06
CNOT9-202ENST00000295701 SGO1Q5FBB7 561 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 OR5M10Q6IEU7 315 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 ADGRE4PQ86SQ3 457 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 NUDT13Q86X67 352 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 OR7G1Q8NGA0 311 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 OR14L1PQ8NHC6 308 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 WFDC12Q8WWY7 111 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 CTHRC1Q96CG8 243 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 PHF21BQ96EK2 531 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 DACH2Q96NX9 599 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 WFIKKN1Q96NZ8 548 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 SERPINI1Q99574 410 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 NAPGQ99747 312 aaPredicted RBP8.42□□□□□ -1.06
CNOT9-202ENST00000295701 SSBP4Q9BWG4 385 aaPredicted RBP8.42□□□□□ -1.06
CNOT9-202ENST00000295701 OSBPL11Q9BXB4 747 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 ZBTB26Q9HCK0 441 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 FARSBQ9NSD9 589 aaKnown RBP8.42□□□□□ -1.06
CNOT9-202ENST00000295701 PSD3Q9NYI0 1048 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 MAT2BQ9NZL9 334 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 FETUBQ9UGM5 382 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 ZNF639Q9UID6 485 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 FBXL2Q9UKC9 423 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 EXO1Q9UQ84 846 aaKnown RBP8.42□□□□□ -1.06
CNOT9-202ENST00000295701 PLLPQ9Y342 182 aa8.42□□□□□ -1.06
CNOT9-202ENST00000295701 RAI1Q7Z5J4 1906 aaPredicted RBP8.41□□□□□ -1.06
CNOT9-202ENST00000295701 SYCE1LA8MT33 242 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 A8MXE2 369 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 H0Y3Z8 333 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 H7C1Q1 480 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 PLOD2O00469 737 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 PPP6CO00743 305 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 SMAD7O15105 426 aaKnown RBP8.41□□□□□ -1.06
CNOT9-202ENST00000295701 ACTL6AO96019 429 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 CTAGE8P0CG41 777 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 PCSK2P16519 638 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 ARL1P40616 181 aaPredicted RBP8.41□□□□□ -1.06
CNOT9-202ENST00000295701 CPA2P48052 419 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 LHX2P50458 406 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 CCNG1P51959 295 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 GFRA1P56159 465 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 RPP38P78345 283 aaKnown RBP8.41□□□□□ -1.06
CNOT9-202ENST00000295701 PHEXP78562 749 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 MRPS35P82673 323 aaKnown RBP8.41□□□□□ -1.06
CNOT9-202ENST00000295701 PLCXD2Q0VAA5 305 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 ACAP2Q15057 778 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 SF3B4Q15427 424 aaKnown RBP eCLIP8.41□□□□□ -1.061e-6■■■□□ 16.5
CNOT9-202ENST00000295701 CCNYL2Q5T2Q4 361 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 SHEQ5VZ18 495 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 SLC30A6Q6NXT4 461 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 VWA1Q6PCB0 445 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 ZDHHC24Q6UX98 284 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 NUP54Q7Z3B4 507 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 CTAGE4Q8IX94 777 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 PTGR2Q8N8N7 351 aaPredicted RBP8.41□□□□□ -1.06
CNOT9-202ENST00000295701 OR52R1Q8NGF1 315 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 RHEBL1Q8TAI7 183 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 FBXO25Q8TCJ0 367 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 TMBIM1Q969X1 311 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 ATP6V1E2Q96A05 226 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 TM4SF18Q96CE8 201 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 REPS1Q96D71 796 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 LCORQ96JN0 433 aaPredicted RBP8.41□□□□□ -1.06
CNOT9-202ENST00000295701 Q96MF0 132 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 PIGQQ9BRB3 760 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 OR2B2Q9GZK3 357 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 BEX4Q9NWD9 120 aaPredicted RBP8.41□□□□□ -1.06
CNOT9-202ENST00000295701 KLHL28Q9NXS3 571 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 KLRF1Q9NZS2 232 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 CLCF1Q9UBD9 225 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 HEY2Q9UBP5 337 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 PCDHA9Q9Y5H5 950 aa8.41□□□□□ -1.06
CNOT9-202ENST00000295701 A0A087X1B8 175 aa8.4□□□□□ -1.06
CNOT9-202ENST00000295701 A0A096LPK6 155 aa8.4□□□□□ -1.06
CNOT9-202ENST00000295701 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.4□□□□□ -1.06
CNOT9-202ENST00000295701 A0A1W2PNV4 684 aa8.4□□□□□ -1.06
CNOT9-202ENST00000295701 PRAMEF25A6NGN4 478 aa8.4□□□□□ -1.06
CNOT9-202ENST00000295701 DEFB108AA8MXU0 73 aa8.4□□□□□ -1.06
CNOT9-202ENST00000295701 H0YC42 278 aa8.4□□□□□ -1.06
CNOT9-202ENST00000295701 CASKO14936 926 aa8.4□□□□□ -1.06
CNOT9-202ENST00000295701 ZIC3O60481 467 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms