RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 IRF8Q02556 426 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 HLXQ14774 488 aaPredicted RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 ZC3H14Q6PJT7 736 aaKnown RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 PLEKHH3Q7Z736 793 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 TEX19Q8NA77 164 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 BCL7CQ8WUZ0 217 aaPredicted RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 PCNPQ8WW12 178 aaKnown RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 FOXJ1Q92949 421 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 MRPS24Q96EL2 167 aaKnown RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 DDOQ99489 341 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 SEPT5Q99719 369 aaPredicted RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 WRAP53Q9BUR4 548 aaKnown RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 MFRPQ9BY79 579 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 NKX6-2Q9C056 277 aaPredicted RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 RERGLQ9H628 205 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 ASB8Q9H765 288 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 TSR3Q9UJK0 312 aaKnown RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 CAMK2AQ9UQM7 478 aa13.43□□□□□ -0.26
FUBP1-201ENST00000294623 DNMT3AQ9Y6K1 912 aaPredicted RBP13.43□□□□□ -0.26
FUBP1-201ENST00000294623 SMIM30A4D0T7 59 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 C5orf58C9J3I9 102 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 EGFP01133 1207 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 CXCL2P19875 107 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 THBS2P35442 1172 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 NSG1P42857 185 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 RGRP47804 291 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 GPR15P49685 360 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 MECP2P51608 486 aaKnown RBP13.42□□□□□ -0.26
FUBP1-201ENST00000294623 GPR17Q13304 367 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 MADCAM1Q13477 382 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 KLF9Q13886 244 aaPredicted RBP13.42□□□□□ -0.26
FUBP1-201ENST00000294623 MICBQ29980 383 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 EOGTQ5NDL2 527 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 ADNP2Q6IQ32 1131 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 C1orf94Q6P1W5 598 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 RNF180Q86T96 592 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 CIR1Q86X95 450 aaPredicted RBP13.42□□□□□ -0.26
FUBP1-201ENST00000294623 OR1M1Q8NGA1 313 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 HAVCR2Q8TDQ0 301 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 PPP1R16AQ96I34 528 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 ZNF354BQ96LW1 612 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 ZFP42Q96MM3 310 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 TMED9Q9BVK6 235 aa13.42□□□□□ -0.26
FUBP1-201ENST00000294623 OR2M5A3KFT3 312 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 PRR23D1E9PI22 279 aaPredicted RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 NEDD8-MDP1E9PL57 170 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 TEX46H3BTG2 121 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 HYAL3O43820 417 aaPredicted RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 FZD7O75084 574 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 REM1O75628 298 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 NCR1O76036 304 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 ALDOBP05062 364 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 PRR23D2P0DMB1 279 aaPredicted RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 SMIM10L2AP0DMW4 78 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 SMIM10L2BP0DMW5 78 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 UQCRC2P22695 453 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 MAZP56270 477 aaKnown RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 HBA1P69905 142 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 RAE1P78406 368 aaKnown RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 ZNF763Q0D2J5 394 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 EFEMP1Q12805 493 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 ZNF155Q12901 538 aaPredicted RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 SNTB2Q13425 540 aaKnown RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 PUM1Q14671 1186 aaKnown RBP eCLIP13.41□□□□□ -0.264e-7■■□□□ 11.4
FUBP1-201ENST00000294623 SLC9B2Q86UD5 537 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 SAMD12Q8N8I0 201 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 OR1S1Q8NH92 325 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 TEX47Q8TBZ9 253 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 SETD7Q8WTS6 366 aaKnown RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 POF1BQ8WVV4 589 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 TCEAL4Q96EI5 215 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 MS4A7Q9GZW8 240 aaPredicted RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 WDR26Q9H7D7 661 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 TBC1D17Q9HA65 648 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 MARCH2Q9P0N8 246 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 PTGFRNQ9P2B2 879 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 CRLS1Q9UJA2 301 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 FBXW2Q9UKT8 454 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 BPTFQ12830 3046 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 SHISA3A0PJX4 238 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 C2orf78A6NCI8 922 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 RNF13O43567 381 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 HPP00738 406 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 HRGP04196 525 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 HIST1H2ABP04908 130 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 PGFP49763 221 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 SEC61A1P61619 476 aaKnown RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 DSC1Q08554 894 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 DDX39BQ13838 428 aaKnown RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 TCTN3Q6NUS6 607 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 DBX2Q6ZNG2 339 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 CHST9Q7L1S5 443 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 HIST3H2AQ7L7L0 130 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 CDC26Q8NHZ8 85 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
FUBP1-201ENST00000294623 HIST1H2ACQ93077 130 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 C12orf66Q96MD2 445 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 PKP4Q99569 1192 aa13.41□□□□□ -0.26
FUBP1-201ENST00000294623 POLMQ9NP87 494 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms