RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 KCNE3Q9Y6H6 103 aa8.56□□□□□ -1.04
PDPN-201ENST00000294489 IGHV5-51A0A0C4DH38 117 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 LY6G6EA0A0G2JKS1 128 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 H3BMQ9 156 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 SYT5O00445 386 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 FOXS1O43638 330 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 WBP4O75554 376 aaKnown RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 MED26O95402 600 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 EPHA8P29322 1005 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 IFNA8P32881 189 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 HOXD12P35452 270 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 KRT20P35900 424 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 PPM1FP49593 454 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 UGT2B15P54855 530 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 GPLD1P80108 840 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 EMX1Q04741 257 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 PIN1Q13526 163 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 SMN1Q16637 294 aaKnown RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 GTF2IRD2BQ6EKJ0 949 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 ZNF770Q6IQ21 691 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 WDR74Q6RFH5 385 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 FAM111BQ6SJ93 734 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 OLIG3Q7RTU3 272 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 PRSS42Q7Z5A4 293 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 GTF2IRD2Q86UP8 949 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 LACC1Q8IV20 430 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 LINC00471Q8N535 108 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 OR4D11Q8NGI4 311 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 RHOXF1Q8NHV9 184 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 RAB2BQ8WUD1 216 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 SLC9A6Q92581 669 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 HOXB13Q92826 284 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 MUL1Q969V5 352 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 COG8Q96MW5 612 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 RSPO3Q9BXY4 272 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 UCK2Q9BZX2 261 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 SLC38A1Q9H2H9 487 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 KLHL28Q9NXS3 571 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 U3KQA8 63 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 COL5A1P20908 1838 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 A0A1W2PRQ8 180 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 RHPN2P1A8MT19 583 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 ZNF99A8MXY4 864 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 LAMTOR5O43504 91 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 HRO43593 1189 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 SEMA7AO75326 666 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 GPR75O95800 540 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 PCMT1P22061 227 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 CRISP1P54107 249 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 GFERP55789 205 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 IGLV3-21P80748 117 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 SHC2P98077 582 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 TEKQ02763 1124 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 MVKQ03426 396 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 CHRNEQ04844 493 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 DGCR6Q14129 220 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 PTGES3Q15185 160 aaKnown RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 ZNF628Q5EBL2 1059 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 KLHL17Q6TDP4 642 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 PRSS48Q7RTY5 328 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 SLC16A11Q8NCK7 471 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 TMEM52Q8NDY8 209 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 ZNF675Q8TD23 568 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 SAP25Q8TEE9 199 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 NR4A3Q92570 626 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 ANKRD9Q96BM1 317 aaPredicted RBP8.55□□□□□ -1.04
PDPN-201ENST00000294489 TIMMDC1Q9NPL8 285 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 A4GNTQ9UNA3 340 aa8.55□□□□□ -1.04
PDPN-201ENST00000294489 A0A087WV62 115 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 YKT6O15498 198 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 MPZL2O60487 215 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 LDB3O75112 727 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 ZBTB11O95625 1053 aaPredicted RBP8.54□□□□□ -1.04
PDPN-201ENST00000294489 NT5EP21589 574 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 FUT4P22083 530 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 POU1F1P28069 291 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 CD1CP29017 333 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 MAPK10P53779 464 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 ID2Q02363 134 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 MGAT2Q10469 447 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 LAIR1Q6GTX8 287 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 HEPHL1Q6MZM0 1159 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 KMT5CQ86Y97 462 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 OR5T3Q8NGG3 340 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 OR6T1Q8NGN1 323 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 ADAMTS18Q8TE60 1221 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 APH1BQ8WW43 257 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 SLC35A4Q96G79 324 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 PRRC1Q96M27 445 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 QRSL1Q9H0R6 528 aaKnown RBP8.54□□□□□ -1.04
PDPN-201ENST00000294489 STARD5Q9NSY2 213 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 PLCXD1Q9NUJ7 323 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 C19orf53Q9UNZ5 99 aaPredicted RBP8.54□□□□□ -1.04
PDPN-201ENST00000294489 PCDHGA10Q9Y5H3 936 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 DSPPQ9NZW4 1301 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 KMT2EQ8IZD2 1858 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 SGK494L7N484 410 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 FGF17O60258 216 aa8.54□□□□□ -1.04
PDPN-201ENST00000294489 NSA2O95478 260 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms