RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 HOXB9P17482 250 aaPredicted RBP16.39■□□□□ 0.21
SHANK1-201ENST00000293441 RPS3P23396 243 aaKnown RBP eCLIP16.39■□□□□ 0.21
SHANK1-201ENST00000293441 ARL3P36405 182 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 MAB21L1Q13394 359 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 RSU1Q15404 277 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 RNF38Q9H0F5 515 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 CDH20Q9HBT6 801 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 DMRT3Q9NQL9 472 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 SLC7A7Q9UM01 511 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 ERCC1P07992 297 aaPredicted RBP16.39■□□□□ 0.21
SHANK1-201ENST00000293441 STSP08842 583 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 FAM189BP81408 668 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 MARCH8Q5T0T0 291 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 SHFQ7M4L6 423 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 IGFN1Q86VF2 1251 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 ARHGAP12Q8IWW6 846 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 MYLIPQ8WY64 445 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 MAGIXQ9H6Y5 334 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 RDH8Q9NYR8 311 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 REV1Q9UBZ9 1251 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 NUP98P52948 1817 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 CNOT4O95628 575 aaKnown RBP16.39■□□□□ 0.21
SHANK1-201ENST00000293441 GSTT2P0CG29 244 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 EN2P19622 333 aaPredicted RBP16.39■□□□□ 0.21
SHANK1-201ENST00000293441 NPRL3Q12980 569 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 FAM76BQ5HYJ3 339 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 TEX26Q8N6G2 289 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 LRRC20Q8TCA0 184 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 DNTTIP1Q9H147 329 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 EPHA4P54764 986 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 CTC1Q2NKJ3 1217 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 HCFC2Q9Y5Z7 792 aa16.39■□□□□ 0.21
SHANK1-201ENST00000293441 NARSO43776 548 aaKnown RBP16.38■□□□□ 0.21
SHANK1-201ENST00000293441 SLITRK5O94991 958 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 RGS19P49795 217 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 FAM205BPQ63HN1 556 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 LCTLQ6UWM7 567 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 CPXM2Q8N436 756 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 SCGB1C1Q8TD33 95 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 NEIL2Q969S2 332 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 DUSP23Q9BVJ7 150 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 FAM171A2A8MVW0 826 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 YY2O15391 372 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 GSCP56915 257 aaPredicted RBP16.38■□□□□ 0.21
SHANK1-201ENST00000293441 MAP4K2Q12851 820 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 OR2T4Q8NH00 348 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 OR51B6Q9H340 312 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 MKS1Q9NXB0 559 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 TRAPPC13A5PLN9 417 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 HPRP00739 348 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 MPP2Q14168 576 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 ZNF829Q3KNS6 432 aaPredicted RBP16.38■□□□□ 0.21
SHANK1-201ENST00000293441 NAGSQ8N159 534 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 KCNN3Q9UGI6 736 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 CA5BQ9Y2D0 317 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 C5P01031 1676 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 CHCHD4Q8N4Q1 142 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 OR7G3Q8NG95 312 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 OR5J2Q8NH18 312 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 NPIPA5A0A0B4J1W7 369 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 NPIPA7E9PJI5 369 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 MEN1O00255 615 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 EIF3FO00303 357 aaPredicted RBP16.38■□□□□ 0.21
SHANK1-201ENST00000293441 NPIPA8P0DM63 369 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 EEF1A2Q05639 463 aaKnown RBP16.38■□□□□ 0.21
SHANK1-201ENST00000293441 IQCF1Q8N6M8 205 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 ISG20Q96AZ6 181 aaKnown RBP16.38■□□□□ 0.21
SHANK1-201ENST00000293441 NAALAD2Q9Y3Q0 740 aa16.38■□□□□ 0.21
SHANK1-201ENST00000293441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 MCATQ8IVS2 390 aaKnown RBP16.37■□□□□ 0.21
SHANK1-201ENST00000293441 TMEFF1Q8IYR6 380 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 EID2Q8N6I1 236 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 MFSD8Q8NHS3 518 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 CCDC86Q9H6F5 360 aaKnown RBP16.37■□□□□ 0.21
SHANK1-201ENST00000293441 DNMT3BQ9UBC3 853 aaKnown RBP16.37■□□□□ 0.21
SHANK1-201ENST00000293441 GGT1P19440 569 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 AFF1P51825 1210 aaKnown RBP16.37■□□□□ 0.21
SHANK1-201ENST00000293441 PHC1P78364 1004 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 LRRN1Q6UXK5 716 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 SLC5A8Q8N695 610 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 MYRFLQ96LU7 910 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 DPH1Q9BZG8 443 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 IL17CQ9P0M4 197 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 ERVK-19Q9WJR5 959 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 DRGXA6NNA5 263 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 H7C417 338 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 OR8J1Q8NGP2 316 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 ASB12Q8WXK4 309 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 LRIT1Q9P2V4 623 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 ZCWPW2A0A1B0GU75 182 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 YES1P07947 543 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 IFNGR1P15260 489 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 LCN1P31025 176 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 KIR2DS3Q14952 304 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 STK11Q15831 433 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 FAM78AQ5JUQ0 283 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 C6orf141Q5SZD1 244 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 FAM118AQ9NWS6 357 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 PTBP2Q9UKA9 531 aaKnown RBP16.37■□□□□ 0.21
SHANK1-201ENST00000293441 TMEM189-UBE2V1I3L0A0 370 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms