RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 LGALS12Q96DT0 336 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CRELD1Q96HD1 420 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 MAP3K3Q99759 626 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CAPN10Q9HC96 672 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 OSGIN1Q9UJX0 560 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 FBXW2Q9UKT8 454 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 PLCL2Q9UPR0 1127 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 ZNF780BQ9Y6R6 833 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 IGHV1OR21-1A0A087WYE8 117 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 LOC105369274A0A096LPK9 316 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 LOC102723532A0A0G2JNH3 316 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 SH3D21A4FU49 640 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 PDE9AO76083 593 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CCNB2O95067 398 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 STATHP02808 62 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 TFPTP0C1Z6 253 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 NR2F6P10588 404 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CBLP22681 906 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 MPIP34949 423 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 MLLT3P42568 568 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-201ENST00000292476 VSX2P58304 361 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-201ENST00000292476 PPP1CAP62136 330 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 GARNL3Q5VVW2 1013 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 SLC48A1Q6P1K1 146 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 BHLHB9Q6PI77 547 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 OR4N4Q8N0Y3 316 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 MFSD4AQ8N468 514 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 AMER3Q8N944 861 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 OR4C6Q8NH72 309 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 SAP25Q8TEE9 199 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 COL21A1Q96P44 957 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 TGM7Q96PF1 710 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 BBS4Q96RK4 519 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 GTPBP2Q9BX10 602 aaKnown RBP15.76■□□□□ 0.11
CPSF4-201ENST00000292476 ACER3Q9NUN7 267 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CNOT2Q9NZN8 540 aaKnown RBP15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CDV3Q9UKY7 258 aaKnown RBP15.76■□□□□ 0.11
CPSF4-201ENST00000292476 ATG4BQ9Y4P1 393 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 PCDH15Q96QU1 1955 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 A0A1W2PR48 441 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 FUOMA2VDF0 154 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 C4orf51C9J302 202 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 P2RX6O15547 441 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 OPN1SWP03999 348 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 IFNW1P05000 195 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 GIMD1P0DJR0 217 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 NR4A1P22736 598 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 CPN2P22792 545 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 SOAT1P35610 550 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 CD97P48960 835 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 BCAP31P51572 246 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 OLR1P78380 273 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 NR0B2Q15466 257 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 DEFB134Q4QY38 66 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 WDR74Q6RFH5 385 aaPredicted RBP15.75■□□□□ 0.11
CPSF4-201ENST00000292476 KMT5CQ86Y97 462 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 FAM181AQ8N9Y4 354 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 OR2I1PQ8NGU4 316 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 PSMA8Q8TAA3 256 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 ZCCHC10Q8TBK6 192 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 MOAP1Q96BY2 351 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 RHNO1Q9BSD3 238 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 SYNPO2LQ9H987 977 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 SEMA3GQ9NS98 782 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 SOHLH2Q9NX45 425 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 AASSQ9UDR5 926 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 ACSL6Q9UKU0 697 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 MAP4K5Q9Y4K4 846 aa15.75■□□□□ 0.11
CPSF4-201ENST00000292476 SNRNP200O75643 2136 aaKnown RBP15.74■□□□□ 0.11
CPSF4-201ENST00000292476 PRAMEF25A6NGN4 478 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 EFCAB9A8MZ26 197 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 MAN1A2O60476 641 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 GADD45GO95257 159 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 OXSR1O95747 527 aaPredicted RBP15.74■□□□□ 0.11
CPSF4-201ENST00000292476 AIFM1O95831 613 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 ALOX5P09917 674 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 CSNK2A2P19784 350 aaPredicted RBP15.74■□□□□ 0.11
CPSF4-201ENST00000292476 ARL4DP49703 201 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 ANXA11P50995 505 aaKnown RBP15.74■□□□□ 0.11
CPSF4-201ENST00000292476 CDC42P60953 191 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 VBP1P61758 197 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 TNFRSF17Q02223 184 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 ITGADQ13349 1161 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 DGCR6Q14129 220 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 IRF3Q14653 427 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 OXA1LQ15070 435 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 STPG1Q5TH74 334 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 TUBA3EQ6PEY2 450 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 KANSL1Q7Z3B3 1105 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 APOBEC4Q8WW27 367 aaKnown RBP15.74■□□□□ 0.11
CPSF4-201ENST00000292476 RASSF5Q8WWW0 418 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 GGHQ92820 318 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 BTBD2Q9BX70 525 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 SLIRPQ9GZT3 109 aaKnown RBP15.74■□□□□ 0.11
CPSF4-201ENST00000292476 GAREM1Q9H706 876 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 CXorf36Q9H7Y0 433 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 IMPAD1Q9NX62 359 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 DAPP1Q9UN19 280 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 CACNA1EQ15878 2313 aa15.74■□□□□ 0.11
CPSF4-201ENST00000292476 MDC1Q14676 2089 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms