RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RPP14O95059 124 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 AAK1Q2M2I8 961 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 LRRC56Q8IYG6 542 aaPredicted RBP16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 NTMT1Q9BV86 223 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 EIF5A2Q9GZV4 153 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 CLMPQ9H6B4 373 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 TREX1Q9NSU2 369 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 GRHPRQ9UBQ7 328 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 NUDT19A8MXV4 375 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 M0QZQ0 153 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 RDH16O75452 317 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 LALBAP00709 142 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 RAB3AP20336 220 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 CXCR1P25024 350 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 ERVK-25P63136 954 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 FLI1Q01543 452 aaPredicted RBP16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 MAPK14Q16539 360 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 PSAPL1Q6NUJ1 521 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 VTCN1Q7Z7D3 282 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 TMEM145Q8NBT3 493 aa16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 RBPMSQ93062 196 aaKnown RBP16.64■□□□□ 0.25
PCDHA13-201ENST00000289272 ARPC5O15511 151 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ALDOBP05062 364 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 FOSL2P15408 326 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 S1PR1P21453 382 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ARRB1P49407 418 aaPredicted RBP16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 MLLT1Q03111 559 aaPredicted RBP16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 TDGQ13569 410 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 TMEM173Q86WV6 379 aaPredicted RBP16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 TERB2Q8NHR7 220 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 CASTOR1Q8WTX7 329 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 CYB5D2Q8WUJ1 264 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 SLC7A6Q92536 515 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 FBRSQ9HAH7 460 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ARNT2Q9HBZ2 717 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 Q9N2J8 555 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 TMEM98Q9Y2Y6 226 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ZNF208O43345 1280 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 B4GAT1O43505 415 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 POP7O75817 140 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 GABRA5P31644 462 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 GATMP50440 423 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 TPMTP51580 245 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ASAH1Q13510 395 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 LY6G5CQ5SRR4 150 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 CES4AQ5XG92 561 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ZCCHC10Q8TBK6 192 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 BRIX1Q8TDN6 353 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ZNF566Q969W8 418 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ADAP2Q9NPF8 381 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 SLC22A5O76082 557 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 DBIP07108 87 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 RNASE10Q5GAN6 216 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 CD276Q5ZPR3 534 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 SLC9B2Q86UD5 537 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ZFAND1Q8TCF1 268 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 HRASLS5Q96KN8 279 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 DHRS9Q9BPW9 319 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 LOC100509620A0A075B734 347 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 NDUFS4O43181 175 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ERI3O43414 337 aaKnown RBP16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 GPR37L1O60883 481 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 SYN1P17600 705 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 PYCR1P32322 319 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 OR4K5Q8NGD3 323 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 OR8K3Q8NH51 312 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 FAM46BQ96A09 425 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 ATG5Q9H1Y0 275 aa16.63■□□□□ 0.25
PCDHA13-201ENST00000289272 RAB40ALP0C0E4 278 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 HNF1BP35680 557 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 MEF2DQ14814 521 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 RAB11BQ15907 218 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 UAP1L1Q3KQV9 507 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 SLC39A5Q6ZMH5 540 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 OR4K1Q8NGD4 311 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 OR2L8Q8NGY9 312 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 RAB40AQ8WXH6 277 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 SPHK2Q9NRA0 654 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 ZBTB42B2RXF5 422 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 AKAIN1P0CW23 69 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 IL1RNP18510 177 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 TUBB3Q13509 450 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 ATXN7L3Q14CW9 347 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 TMEM35AQ53FP2 167 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 OR52B6Q8NGF0 335 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 GRHL3Q8TE85 626 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 URM1Q9BTM9 101 aaKnown RBP16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 SLC38A1Q9H2H9 487 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 MED17Q9NVC6 651 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 ADORA3P0DMS8 318 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 MC1RQ01726 317 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 C3orf38Q5JPI3 329 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 TMEM164Q5U3C3 297 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 RTL10Q7L3V2 364 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 ZNF440Q8IYI8 595 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 TMEM185AQ8NFB2 350 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 VAPAQ9P0L0 249 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 C9J4A7 227 aa16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 POLR1CO15160 346 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-201ENST00000289272 FMO6PO60774 539 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms