RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 OCRLQ01968 901 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 C3AR1Q16581 482 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 PGS1Q32NB8 556 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 PACS2Q86VP3 889 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 NUDT8Q8WV74 236 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 NODALQ96S42 347 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 ADOQ96SZ5 270 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 ANGPTL4Q9BY76 406 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 ZDHHC11Q9H8X9 412 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 C3orf14Q9HBI5 128 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 B4GALT7Q9UBV7 327 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 TINAGQ9UJW2 476 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 ZNF835Q9Y2P0 537 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 LRRC3CA6NJW4 275 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 SLCO1B7G3V0H7 640 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 CCL21O00585 134 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 SNX4O95219 450 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 PSMG1O95456 288 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 RNF224P0DH78 156 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 PTGS2P35354 604 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 CLDN8P56748 225 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 HYAL4Q2M3T9 481 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 LARP4Q71RC2 724 aaKnown RBP eCLIP23.05■■□□□ 1.287e-6■□□□□ 9
PDF-201ENST00000288022 WDR75Q8IWA0 830 aaKnown RBP23.05■■□□□ 1.28
PDF-201ENST00000288022 NATD1Q8N6N6 113 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 NUP43Q8NFH3 380 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 OR4N2Q8NGD1 307 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 CEP70Q8NHQ1 597 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 DYDC1Q8WWB3 177 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 RELTQ969Z4 430 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 TMCO6Q96DC7 493 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 Q9N2J8 555 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 KLRF1Q9NZS2 232 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 MAPRE3Q9UPY8 281 aa23.05■■□□□ 1.28
PDF-201ENST00000288022 GOLGA8QA0A0J9YX86 632 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 GOLGA8OA6NCC3 632 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 OR6C70A6NIJ9 312 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 GOLGA8NF8WBI6 632 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 SDHDO14521 159 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 KLF11O14901 512 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 ABCB7O75027 752 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 TRIM3O75382 744 aaPredicted RBP23.04■■□□□ 1.28
PDF-201ENST00000288022 LDLRP01130 860 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 RFPL3SP0C7P2 107 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 SLC10A1Q14973 349 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 ARHGAP11AQ6P4F7 1023 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 FGD2Q7Z6J4 655 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 CHERPQ8IWX8 916 aaKnown RBP23.04■■□□□ 1.28
PDF-201ENST00000288022 RIMKLAQ8IXN7 391 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 LRRC34Q8IZ02 419 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 EFHD2Q96C19 240 aaPredicted RBP23.04■■□□□ 1.28
PDF-201ENST00000288022 COQ8BQ96D53 544 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 SLC35A4Q96G79 324 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 DUSP26Q9BV47 211 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 OSBPL11Q9BXB4 747 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 DPY30Q9C005 99 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 BHLHE41Q9C0J9 482 aaPredicted RBP23.04■■□□□ 1.28
PDF-201ENST00000288022 LDAHQ9H6V9 325 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 EXO5Q9H790 373 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 ZNF703Q9H7S9 590 aaPredicted RBP23.04■■□□□ 1.28
PDF-201ENST00000288022 SUCOQ9UBS9 1254 aaKnown RBP23.04■■□□□ 1.28
PDF-201ENST00000288022 SNX8Q9Y5X2 465 aa23.04■■□□□ 1.28
PDF-201ENST00000288022 PRAMEF25A6NGN4 478 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 PRRG2O14669 202 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 EMC8O43402 210 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 TPOP07202 933 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 CELA3AP09093 270 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 GDF1P27539 372 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 PRR5P85299 388 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 EFR3AQ14156 821 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 MLC1Q15049 377 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 LSM12Q3MHD2 195 aaKnown RBP23.03■■□□□ 1.28
PDF-201ENST00000288022 CYP27C1Q4G0S4 372 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 Q6ZPB1 254 aaPredicted RBP23.03■■□□□ 1.28
PDF-201ENST00000288022 LRRC8CQ8TDW0 803 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 OR5P2Q8WZ92 322 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 MS4A4EQ96PG1 132 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 LMF2Q9BU23 707 aaKnown RBP23.03■■□□□ 1.28
PDF-201ENST00000288022 WDR55Q9H6Y2 383 aaPredicted RBP23.03■■□□□ 1.28
PDF-201ENST00000288022 PLSCR2Q9NRY7 297 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 CBLCQ9ULV8 474 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 LIPGQ9Y5X9 500 aa23.03■■□□□ 1.28
PDF-201ENST00000288022 TTC36A6NLP5 189 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 CFLARO15519 480 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 TSPAN2O60636 221 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 SASH3O75995 380 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 C6orf47O95873 294 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 ESRRAP11474 423 aaPredicted RBP23.02■■□□□ 1.28
PDF-201ENST00000288022 EPHA3P29320 983 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 GABRA3P34903 492 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 RFX3P48380 749 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 PNLIPRP2P54317 469 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 C21orf58P58505 322 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 MRPS22P82650 360 aaKnown RBP23.02■■□□□ 1.28
PDF-201ENST00000288022 GAB1Q13480 694 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 DECR1Q16698 335 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 SPDYE7PQ495Y7 208 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 VPS26BQ4G0F5 336 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 NXNQ6DKJ4 435 aa23.02■■□□□ 1.28
PDF-201ENST00000288022 SLC30A6Q6NXT4 461 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms