RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ZNF765Q7L2R6 523 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 C12orf40Q86WS4 652 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 ARIH2OSQ8N7S6 290 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 OR5K2Q8NHB8 316 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 NEIL3Q8TAT5 605 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 UPRTQ96BW1 309 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 ZC3HAV1LQ96H79 300 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 ZNF764Q96H86 408 aaPredicted RBP12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 ZSWIM3Q96MP5 696 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 BBS4Q96RK4 519 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 DDX31Q9H8H2 851 aaKnown RBP12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 LTBP2Q14767 1821 aa12.44□□□□□ -0.42
SLC28A1-201ENST00000286749 A0A0A6YYD5 115 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 C2orf92A0A1B0GVN3 265 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 CD8B2A6NJW9 211 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 TNFRSF10AO00220 468 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 GABRPO00591 440 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 VEGFDO43915 354 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 HMGN2P05204 90 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 FAM157BP0CG42 384 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 CD8BP10966 210 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 CHRNB1P11230 501 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 GNSP15586 552 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 PPM1AP35813 382 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 IL12RB1P42701 662 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 GPLD1P80108 840 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 ARHGAP15Q53QZ3 475 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 LYPD8Q6UX82 237 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 LSRQ86X29 649 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 C16orf58Q96GQ5 468 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 TMEM43Q9BTV4 400 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 AICDAQ9GZX7 198 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 SEMA4GQ9NTN9 838 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 TAS2R7Q9NYW3 318 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 MARK1Q9P0L2 795 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 GPR55Q9Y2T6 319 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 PCDHGB7Q9Y5F8 929 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 A0A0G2JMP0 313 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 LOC102723532A0A0G2JNH3 316 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 A0A1W2PPV9 198 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 ZNF780AO75290 641 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 CISD3P0C7P0 127 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 ADRB3P13945 408 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 NTSP30990 170 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 HTR2BP41595 481 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 GZMKP49863 264 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 TAS2R38P59533 333 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 NTHL1P78549 312 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 ZNF155Q12901 538 aaPredicted RBP12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 TSPAN31Q12999 210 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 POGLUT1Q8NBL1 392 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 DUSP18Q8NEJ0 188 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 OR4Q3Q8NH05 313 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 GFM1Q96RP9 751 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 MACROD1Q9BQ69 325 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 MENTQ9BUN1 341 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 PINK1Q9BXM7 581 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 GON7Q9BXV9 100 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 RNF32Q9H0A6 362 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 IRF2BPLQ9H1B7 796 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 ADAM29Q9UKF5 820 aa12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 TMA7Q9Y2S6 64 aaKnown RBP12.43□□□□□ -0.42
SLC28A1-201ENST00000286749 ISM1B1AKI9 464 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 SMLR1H3BR10 107 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 DVL2O14641 736 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 CASC3O15234 703 aaKnown RBP12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 RHOP08100 348 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 ACP5P13686 325 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 TRIM23P36406 574 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 INPP1P49441 399 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 CTBP2P56545 445 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 CLDN20P56880 219 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 DUSP2Q05923 314 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 DPTQ07507 201 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 COL9A2Q14055 689 aaPredicted RBP12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 ARHGAP19Q14CB8 494 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 ZNF311Q5JNZ3 666 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 TIGD3Q6B0B8 471 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 METAP1DQ6UB28 335 aaPredicted RBP12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 RASSF6Q6ZTQ3 369 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 VRK2Q86Y07 508 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 LIX1LQ8IVB5 337 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 BBS1Q8NFJ9 593 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 ZG16BQ96DA0 208 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 KLHL31Q9H511 634 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 TRIM45Q9H8W5 580 aaPredicted RBP12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 TMEM39AQ9NV64 488 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 MCUBQ9NWR8 336 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 SNRNP200O75643 2136 aaKnown RBP12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 MYO7AQ13402 2215 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 A0A0G2JPF8 293 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 A0A1W2PS29 197 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 HNRNPCL2B2RXH8 293 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 HNRNPCL3B7ZW38 293 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 MAN2B1O00754 1011 aa12.42□□□□□ -0.42
SLC28A1-201ENST00000286749 PGRMC2O15173 223 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms