RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 C17orf62Q9BQA9 187 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 DPH7Q9BTV6 452 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 MRPS30Q9NP92 439 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 TEX10Q9NXF1 929 aaPredicted RBP17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 ZNF624Q9P2J8 865 aaPredicted RBP17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 RHCGQ9UBD6 479 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 TMCC3Q9ULS5 477 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 MGAT4BQ9UQ53 548 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 BOLA1Q9Y3E2 137 aa17.23■□□□□ 0.35
PDLIM3-201ENST00000284767 PRKRAO75569 313 aaKnown RBP17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 SLC35F1Q5T1Q4 408 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 ZNF438Q7Z4V0 828 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 WDR92Q96MX6 357 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 TEFMQ96QE5 360 aaKnown RBP17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 DNAJC27Q9NZQ0 273 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 SLCO1B1Q9Y6L6 691 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 NDUFS4O43181 175 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 HBQ1P09105 142 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 MYL9P24844 172 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 SOAT1P35610 550 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 KIAA1024LP59773 190 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 ARPC4P59998 168 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 BNC1Q01954 994 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 MFSD4BQ5TF39 518 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 CASP12Q6UXS9 341 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 DGLUCYQ7Z3D6 616 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 PHC2Q8IXK0 858 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 OR8J1Q8NGP2 316 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 CREB3L4Q8TEY5 395 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 PATE1Q8WXA2 126 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 FRMD6Q96NE9 622 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 TCEAL2Q9H3H9 227 aaPredicted RBP17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 RANGRFQ9HD47 186 aaPredicted RBP17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 ABCB9Q9NP78 766 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 PLSCR3Q9NRY6 295 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 CYP8B1Q9UNU6 501 aa17.22■□□□□ 0.35
PDLIM3-201ENST00000284767 TRBV4-1A0A0J9YWV2 114 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 A0A1W2PRB8 838 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 B4DXG7 233 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 MYL12BO14950 172 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 MBTPS2O43462 519 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 PRICKLE3O43900 615 aaPredicted RBP17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 CSF3P09919 207 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 ZNF91Q05481 1191 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 PDZK1Q5T2W1 519 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 HSDL2Q6YN16 418 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 OR2L3Q8NG85 312 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 MTERF3Q96E29 417 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 C11orf54Q9H0W9 315 aaPredicted RBP17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 MVB12BQ9H7P6 319 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 RNF121Q9H920 327 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 MDC1Q14676 2089 aaKnown RBP17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 LINC00854A0A1B0GVQ3 168 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 FABP12A6NFH5 140 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 ISM1B1AKI9 464 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 FFAR1O14842 300 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 CDRT1O95170 752 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 SEMA4FO95754 770 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 CHRNB1P11230 501 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 PTGER1P34995 402 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 DSTNP60981 165 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 LRRC32Q14392 662 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 OCLNQ16625 522 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 ALG11Q2TAA5 492 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 LEXMQ3ZCV2 418 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 REEP3Q6NUK4 255 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 ZNF793Q6ZN11 406 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 APOBEC4Q8WW27 367 aaKnown RBP17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 MIXL1Q9H2W2 232 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 AHSPQ9NZD4 102 aa17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 NUFIP1Q9UHK0 495 aaKnown RBP17.21■□□□□ 0.35
PDLIM3-201ENST00000284767 LRRC72A6NJI9 287 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 HLA-DMAP28067 261 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 LIM2P55344 173 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 RPS26P62854 115 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 DAB2P98082 770 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 GALK2Q01415 458 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 PUM1Q14671 1186 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 DUSP7Q16829 419 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 SNAP47Q5SQN1 464 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 Q6ZSR6 202 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 SLC22A18ASQ8N1D0 253 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 FAM160A2Q8N612 972 aaPredicted RBP17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 OR13H1Q8NG92 308 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 RLN3Q8WXF3 142 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 EXOSC8Q96B26 276 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 TSSK6Q9BXA6 273 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 GON7Q9BXV9 100 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 TXNL4BQ9NX01 149 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 FANCMQ8IYD8 2048 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 GLOD5A6NK44 160 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 FAM227AF5H4B4 570 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 FAAHO00519 579 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 XKP51811 444 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 SNRPNP63162 240 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 DDI2Q5TDH0 399 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 LIPKQ5VXJ0 399 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 LIX1LQ8IVB5 337 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 CACTIN-AS1Q8N1I8 211 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 LCN9Q8WX39 176 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms