RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 FNDC3BQ53EP0 1204 aaKnown RBP12.14□□□□□ -0.47
C9orf3-201ENST00000277198 SYT14P1Q58G82 188 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 USP30Q70CQ3 517 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 ZER1Q7Z7L7 766 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 OR8H2Q8N162 312 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 OR4K5Q8NGD3 323 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 VANGL1Q8TAA9 524 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-201ENST00000277198 SUN3Q8TAQ9 357 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 AMDHD1Q96NU7 426 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 OR2B2Q9GZK3 357 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 SRRQ9GZT4 340 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 ABCG4Q9H172 646 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 OR51I1Q9H343 314 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 SERHL2Q9H4I8 314 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 TMEM165Q9HC07 324 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 FGF20Q9NP95 211 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-201ENST00000277198 PARD6AQ9NPB6 346 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 SLC35C2Q9NQQ7 365 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 ERVK13-1Q9NX77 482 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 TVP23BQ9NYZ1 205 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 ACSL5Q9ULC5 683 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 PLAGL1Q9UM63 463 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 ABCA7Q8IZY2 2146 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 A0A1W2PPV9 198 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 C1QTNF3-AMACRE9PGA6 284 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 SYT5O00445 386 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 TLX2O43763 284 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-201ENST00000277198 OR12D1P0DN82 309 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 GAAP10253 952 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 HOXB2P14652 356 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 TNNI3P19429 210 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 MMP11P24347 488 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 NTSP30990 170 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 IL12RB1P42701 662 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 SCN1BQ07699 218 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 PIN1Q13526 163 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-201ENST00000277198 TPBGQ13641 420 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 GINS1Q14691 196 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 TMEM44Q2T9K0 475 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 PLK5Q496M5 336 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 KIAA1161Q6NSJ0 714 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 XKRXQ6PP77 449 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 UBE3DQ7Z6J8 389 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 RBM45Q8IUH3 476 aaKnown RBP12.14□□□□□ -0.47
C9orf3-201ENST00000277198 CAMKK1Q8N5S9 505 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 GDPD1Q8N9F7 314 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 MORN4Q8NDC4 146 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 OR52I1Q8NGK6 324 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 AP3S1Q92572 193 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 SNX18Q96RF0 628 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 PINK1Q9BXM7 581 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 GLIPR2Q9H4G4 154 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 ANKRD19PQ9H560 264 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 NEK6Q9HC98 313 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 CUEDC1Q9NWM3 386 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-201ENST00000277198 ZNF221Q9UK13 617 aa12.14□□□□□ -0.47
C9orf3-201ENST00000277198 PRAMEF27A3QJZ7 478 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 H7BY64 318 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 PRODHO43272 600 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 PRKYO43930 277 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 ACP2P11117 423 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 NTSR1P30989 418 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 SLC9A3P48764 834 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 WNT4P56705 351 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 SYPL1Q16563 259 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 GLYR1Q49A26 553 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-201ENST00000277198 NDUFAF5Q5TEU4 345 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 RSBN1Q5VWQ0 802 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-201ENST00000277198 FAM180BQ6P0A1 224 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 RAB43Q86YS6 212 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 C2orf73Q8N5S3 287 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-201ENST00000277198 CELF2-AS1Q8N7Q2 184 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 OR6F1Q8NGZ6 308 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 GPR151Q8TDV0 419 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 CREB3L4Q8TEY5 395 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 XAGE5Q8WWM1 108 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 LRR1Q96L50 414 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 ZNF582Q96NG8 517 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-201ENST00000277198 PRAP1Q96NZ9 151 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 COQ7Q99807 217 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 SMOC1Q9H4F8 434 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 MVB12BQ9H7P6 319 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 SNTG1Q9NSN8 517 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 MAN2C1Q9NTJ4 1040 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 ZCCHC3Q9NUD5 404 aaKnown RBP12.13□□□□□ -0.47
C9orf3-201ENST00000277198 C14orf119Q9NWQ9 140 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 TXNL4BQ9NX01 149 aaKnown RBP12.13□□□□□ -0.47
C9orf3-201ENST00000277198 TEX10Q9NXF1 929 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-201ENST00000277198 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 EXOSC1Q9Y3B2 195 aaKnown RBP12.13□□□□□ -0.47
C9orf3-201ENST00000277198 GON4LQ3T8J9 2241 aa12.13□□□□□ -0.47
C9orf3-201ENST00000277198 OR1F1O43749 312 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 IGFBP1P08833 259 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-201ENST00000277198 SLC35G4P0C7Q5 338 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 GABRG2P18507 467 aa12.12□□□□□ -0.47
C9orf3-201ENST00000277198 MAGP20916 626 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms