RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 OSMP13725 252 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 GABRB1P18505 474 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PRKAR1BP31321 381 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 MAP3K8P41279 467 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 GSSP48637 474 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 ROR2Q01974 943 aaKnown RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TEKQ02763 1124 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 DMWDQ09019 674 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TMEM236Q5W0B7 351 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TYW3Q6IPR3 259 aaKnown RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PGBD2Q6P3X8 592 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 P3H2Q8IVL5 708 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 NLGN4XQ8N0W4 816 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 LINC00471Q8N535 108 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 CDRT4Q8N9R6 151 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 FAR1Q8WVX9 515 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 NR4A3Q92570 626 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PRRC1Q96M27 445 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TGM7Q96PF1 710 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PRR14Q9BWN1 585 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 NAA50Q9GZZ1 169 aaKnown RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 CHRNA10Q9GZZ6 450 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TRIM45Q9H8W5 580 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 CCNB1IP1Q9NPC3 277 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 ADAP2Q9NPF8 381 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PRDM6Q9NQX0 595 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 MAN2C1Q9NTJ4 1040 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TMEM9Q9P0T7 183 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 GPR55Q9Y2T6 319 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 WDR45Q9Y484 360 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 RNF215Q9Y6U7 377 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TMEM131Q92545 1883 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TLCD2A6NGC4 264 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF99A8MXY4 864 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 RGS10O43665 173 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TPST2O60704 377 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 CTNSO60931 367 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 CYP7B1O75881 506 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 ATE1O95260 518 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 MT-ND2P03891 347 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 ALDH4A1P30038 563 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 IDH2P48735 452 aaKnown RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PPM1FP49593 454 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 AFF3P51826 1226 aaKnown RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 MAPK10P53779 464 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 EPHA4P54764 986 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 UGT2B15P54855 530 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 TMBIM6P55061 237 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 GFERP55789 205 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 SKP1P63208 163 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 HPCAP84074 193 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 MAP4K2Q12851 820 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 BNIP3Q12983 259 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 FAM53BQ14153 422 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 EXOSC7Q15024 291 aaKnown RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 INAVAQ3KP66 663 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 WDR45BQ5MNZ6 344 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 GARNL3Q5VVW2 1013 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 NKAIN2Q5VXU1 208 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 NIPAL1Q6NVV3 410 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 DGAT2L6Q6ZPD8 337 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PRSS48Q7RTY5 328 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 CCDC103Q8IW40 242 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PEX5LQ8IYB4 626 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 CLIP4Q8N3C7 705 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 STACQ99469 402 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 RHNO1Q9BSD3 238 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 SAP130Q9H0E3 1048 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 POLR2J3Q9H1A7 115 aaKnown RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PDE7BQ9NP56 450 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 DUSP22Q9NRW4 184 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 KLHL28Q9NXS3 571 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 LRIT1Q9P2V4 623 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 PSORS1C1Q9UIG5 152 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 EYSQ5T1H1 3165 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 GON4LQ3T8J9 2241 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 SCN2AQ99250 2005 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 A0A1B0GVT2 93 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 TRIM64BA6NI03 449 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 H3BMQ9 156 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 FRS3O43559 492 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 INMTO95050 263 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 NSA2O95478 260 aaKnown RBP8.94□□□□□ -0.98
TRIM55-201ENST00000276573 ZBTB11O95625 1053 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-201ENST00000276573 S1PR1P21453 382 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 ACVR2AP27037 513 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 POU1F1P28069 291 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 CNR2P34972 360 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 MLLT3P42568 568 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-201ENST00000276573 CTSKP43235 329 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 MAP2K4P45985 399 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 FNTBP49356 437 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 GP2P55259 537 aaKnown RBP8.94□□□□□ -0.98
TRIM55-201ENST00000276573 CDC42P60953 191 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 COX10Q12887 443 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 TARDBPQ13148 414 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRIM55-201ENST00000276573 DUSP8Q13202 625 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 TCTE1Q5JU00 501 aa8.94□□□□□ -0.98
TRIM55-201ENST00000276573 CWF19L1Q69YN2 538 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms