RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 SSTR4P31391 388 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 EFNA3P52797 238 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 HPCAP84074 193 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 OCA2Q04671 838 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 ZNF155Q12901 538 aaPredicted RBP13.13□□□□□ -0.31
SS18-201ENST00000269137 PUM1Q14671 1186 aaKnown RBP eCLIP13.13□□□□□ -0.31
SS18-201ENST00000269137 ELAVL1Q15717 326 aaKnown RBP13.13□□□□□ -0.31
SS18-201ENST00000269137 NRF1Q16656 503 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 MLIPQ5VWP3 458 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 FRRS1Q6ZNA5 592 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 OVCH1Q7RTY7 1134 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 TMEM151BQ8IW70 566 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 ZNF615Q8N8J6 731 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 COX18Q8N8Q8 333 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 OR5K1Q8NHB7 308 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 STT3BQ8TCJ2 826 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 PROX1Q92786 737 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 PMM1Q92871 262 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 ZNF354BQ96LW1 612 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 ZNF300Q96RE9 604 aaPredicted RBP13.13□□□□□ -0.31
SS18-201ENST00000269137 SDF2Q99470 211 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
SS18-201ENST00000269137 ZNF350Q9GZX5 532 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 FOLH1BQ9HBA9 442 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 AKAP7Q9P0M2 348 aaPredicted RBP13.13□□□□□ -0.31
SS18-201ENST00000269137 ERVK-19Q9WJR5 959 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 SH3GLB1Q9Y371 365 aa13.13□□□□□ -0.31
SS18-201ENST00000269137 KIF26BQ2KJY2 2108 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 C7orf72A4D263 438 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 C4orf47A7E2U8 309 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 C17orf105B2RV13 164 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 G3V2T6 193 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 DYRK3O43781 588 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 ZIC2O95409 532 aaPredicted RBP13.12□□□□□ -0.31
SS18-201ENST00000269137 ZGLP1P0C6A0 271 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 CCL4P13236 92 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 UQCRBP14927 111 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 TNFRSF1BP20333 461 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 DCTP40126 519 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 OR1E2P47887 323 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 PSG6Q00889 435 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 ZNHIT3Q15649 155 aaPredicted RBP13.12□□□□□ -0.31
SS18-201ENST00000269137 NSDHLQ15738 373 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 SHQ1Q6PI26 577 aaKnown RBP13.12□□□□□ -0.31
SS18-201ENST00000269137 OLIG3Q7RTU3 272 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 HIPK1Q86Z02 1210 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 GPR151Q8TDV0 419 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 NRBF2Q96F24 287 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 SENP5Q96HI0 755 aaPredicted RBP13.12□□□□□ -0.31
SS18-201ENST00000269137 FBXL20Q96IG2 436 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 LRFN5Q96NI6 719 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 CMKLR1Q99788 373 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 CNPPD1Q9BV87 410 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 OSBPL10Q9BXB5 764 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 PINK1Q9BXM7 581 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 SAP130Q9H0E3 1048 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 OR10A5Q9H207 317 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 SLC26A1Q9H2B4 701 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 PARD6AQ9NPB6 346 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 POLE3Q9NRF9 147 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
SS18-201ENST00000269137 VNN3Q9NY84 501 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 PRODH2Q9UF12 536 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 MKL2Q9ULH7 1088 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 RAB26Q9ULW5 256 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 WDR45Q9Y484 360 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 PCDHGA1Q9Y5H4 931 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 AK5Q9Y6K8 562 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 ENPP4Q9Y6X5 453 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 CUL9Q8IWT3 2517 aa13.12□□□□□ -0.31
SS18-201ENST00000269137 VSTM2BA6NLU5 285 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 MEN1O00255 615 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 SYT5O00445 386 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 EI24O14681 340 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 FCMRO60667 390 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 E2F6O75461 281 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 STX11O75558 287 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 RFPL3O75679 317 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 ALBP02768 609 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 CLPSP04118 112 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 IFNW1P05000 195 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 ALPPP05187 535 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 TGM1P22735 817 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 DNAJA1P31689 397 aaKnown RBP13.11□□□□□ -0.31
SS18-201ENST00000269137 GABRA3P34903 492 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 PGDP52209 483 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 IST1P53990 364 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 POU6F2P78424 691 aaPredicted RBP13.11□□□□□ -0.31
SS18-201ENST00000269137 BLMHQ13867 455 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 DCST2Q5T1A1 773 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 CDCP2Q5VXM1 449 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 TYW3Q6IPR3 259 aaKnown RBP13.11□□□□□ -0.31
SS18-201ENST00000269137 TBPL2Q6SJ96 375 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 LAPTM4BQ86VI4 370 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 FKBP10Q96AY3 582 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 SDCCAG3Q96C92 435 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 CTRCQ99895 268 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 LRFN3Q9BTN0 628 aa13.11□□□□□ -0.31
SS18-201ENST00000269137 AMBRA1Q9C0C7 1298 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms