RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 MPTX1A8MV57 137 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 L7N2F9 121 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 STC2O76061 302 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 PRAMEF12O95522 483 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ADAP00813 363 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ALDOBP05062 364 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ADRB1P08588 477 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 H2AFB2P0C5Z0 115 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 XKP51811 444 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 CASP9P55211 416 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 WDR5P61964 334 aaKnown RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 BCL2L1Q07817 233 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ACSM2AQ08AH3 577 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ELAVL2Q12926 359 aaKnown RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 PTPRRQ15256 657 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 CPTPQ5TA50 214 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ZDHHC20Q5W0Z9 365 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ACSM2BQ68CK6 577 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 LYPD4Q6UWN0 246 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 LINGO4Q6UY18 593 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ASPGQ86U10 573 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 BMPERQ8N8U9 685 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 DCAF4L2Q8NA75 395 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 SCLYQ96I15 445 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 CASD1Q96PB1 797 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 OR4K3Q96R72 315 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 LYSMD1Q96S90 227 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 DDOQ99489 341 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ESRP2Q9H6T0 727 aaKnown RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 ISYNA1Q9NPH2 558 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 SPATA6Q9NWH7 488 aaPredicted RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 TESQ9UGI8 421 aaKnown RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 MLXQ9UH92 298 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ING1Q9UK53 422 aaPredicted RBP12.38□□□□□ -0.43
NUP54-201ENST00000264883 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 ENPP4Q9Y6X5 453 aa12.38□□□□□ -0.43
NUP54-201ENST00000264883 TLX2O43763 284 aaPredicted RBP12.37□□□□□ -0.43
NUP54-201ENST00000264883 SGSHP51688 502 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 RAB8AP61006 207 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 GAB1Q13480 694 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 CDKN3Q16667 212 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 ZSWIM7Q19AV6 140 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 PLEKHS1Q5SXH7 462 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 PDSS1Q5T2R2 415 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 SLC30A8Q8IWU4 369 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 GPR135Q8IZ08 494 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 ASB11Q8WXH4 323 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 ACOT12Q8WYK0 555 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 FOXJ1Q92949 421 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 VWCEQ96DN2 955 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 ELMOD3Q96FG2 381 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 C12orf66Q96MD2 445 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 TMED9Q9BVK6 235 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 CACNG6Q9BXT2 260 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 CYSLTR2Q9NS75 346 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 TVP23BQ9NYZ1 205 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 LINC00587B1AMM8 73 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 RNASET2O00584 256 aaKnown RBP12.37□□□□□ -0.43
NUP54-201ENST00000264883 DRD2P14416 443 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 CXCL2P19875 107 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 TRIM23P36406 574 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 PITPNBP48739 271 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 MAZP56270 477 aaKnown RBP12.37□□□□□ -0.43
NUP54-201ENST00000264883 CHIT1Q13231 466 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 SCARB2Q14108 478 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 IDNKQ5T6J7 187 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 B3GLCTQ6Y288 498 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 ZNF704Q6ZNC4 412 aaPredicted RBP12.37□□□□□ -0.43
NUP54-201ENST00000264883 PAQR7Q86WK9 346 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 LRRC28Q86X40 367 aaPredicted RBP12.37□□□□□ -0.43
NUP54-201ENST00000264883 ZNF687Q8N1G0 1237 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 ZNF527Q8NB42 609 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 OR5M3Q8NGP4 307 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 GOT1L1Q8NHS2 421 aaPredicted RBP12.37□□□□□ -0.43
NUP54-201ENST00000264883 NFKBIDQ8NI38 313 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 SCARB1Q8WTV0 552 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 OSGEPL1Q9H4B0 414 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 TBC1D17Q9HA65 648 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 ZSCAN32Q9NX65 697 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 OR6C2Q9NZP2 312 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 GPR160Q9UJ42 338 aa12.37□□□□□ -0.43
NUP54-201ENST00000264883 PURGQ9UJV8 347 aaKnown RBP12.37□□□□□ -0.43
NUP54-201ENST00000264883 TRBV4-1A0A0J9YWV2 114 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 TMEM129A0AVI4 362 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 COCHO43405 550 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 SULT1B1O43704 296 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 PRKYO43930 277 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 KDM4BO94953 1096 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 VNN2O95498 520 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 ETFAP13804 333 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 UGT2B7P16662 529 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 GATMP50440 423 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 CCR6P51684 374 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 CCL23P55773 120 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 DEFA5Q01523 94 aa12.36□□□□□ -0.43
NUP54-201ENST00000264883 FGL1Q08830 312 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms