RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 GK2Q14410 553 aaPredicted RBP17.09■□□□□ 0.33
COL5A3-201ENST00000264828 FGFBP1Q14512 234 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 LCN8Q6JVE9 175 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 POC1BQ8TC44 478 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 NPRL2Q8WTW4 380 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 PEX11GQ96HA9 241 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 FAM83CQ9BQN1 747 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 DEFB126Q9BYW3 111 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 PCDHGA7Q9Y5G6 932 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 KIF13AQ9H1H9 1805 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 LRRTM2O43300 516 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 LAMP1P11279 417 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 PRSS48Q7RTY5 328 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF100Q8IYN0 542 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 NLGN4YQ8NFZ3 816 aaPredicted RBP17.09■□□□□ 0.33
COL5A3-201ENST00000264828 E7ESA3 106 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 LYRM1O43325 122 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 RPS2P15880 293 aaKnown RBP17.09■□□□□ 0.33
COL5A3-201ENST00000264828 ERVPABLB-1P60509 514 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 RCAN2Q14206 197 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 MLC1Q15049 377 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF674Q2M3X9 581 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 LILRB2Q8N423 598 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 SYT14Q8NB59 555 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 CHPT1Q8WUD6 406 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF689Q96CS4 500 aaPredicted RBP17.09■□□□□ 0.33
COL5A3-201ENST00000264828 NMNAT1Q9HAN9 279 aaPredicted RBP17.09■□□□□ 0.33
COL5A3-201ENST00000264828 LATO43561 262 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 GSRP00390 522 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 PAHP00439 452 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 ETV4P43268 484 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 HTR6P50406 440 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 SHC2P98077 582 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 DLX2Q07687 328 aaPredicted RBP17.09■□□□□ 0.33
COL5A3-201ENST00000264828 MALLQ13021 153 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 PRR18Q8N4B5 295 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 LMO3Q8TAP4 145 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 PCYT2Q99447 389 aa17.09■□□□□ 0.33
COL5A3-201ENST00000264828 RPS15AP62244 130 aaKnown RBP17.08■□□□□ 0.33
COL5A3-201ENST00000264828 TP53I3Q53FA7 332 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 ZNF551Q7Z340 670 aaPredicted RBP17.08■□□□□ 0.33
COL5A3-201ENST00000264828 PIWIL3Q7Z3Z3 882 aaKnown RBP17.08■□□□□ 0.33
COL5A3-201ENST00000264828 SLC35F2Q8IXU6 374 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 TEX10Q9NXF1 929 aaPredicted RBP17.08■□□□□ 0.33
COL5A3-201ENST00000264828 AP1M2Q9Y6Q5 423 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 GGT3PA6NGU5 568 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 TFP02787 698 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 FBXO45P0C2W1 286 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 ALDH3B1P43353 468 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 FBXO27Q8NI29 283 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 DPH1Q9BZG8 443 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 C2orf42Q9NWW7 574 aa17.08■□□□□ 0.33
COL5A3-201ENST00000264828 H3BMQ9 156 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 CSNK2A1P68400 391 aaPredicted RBP17.08■□□□□ 0.32
COL5A3-201ENST00000264828 SRYQ05066 204 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 CSNK2A3Q8NEV1 391 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 COG8Q96MW5 612 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 CNIH4Q9P003 139 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 SLC7A7Q9UM01 511 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 C5P01031 1676 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.08■□□□□ 0.32
COL5A3-201ENST00000264828 DESI1Q6ICB0 168 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 ZNF529Q6P280 563 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 SLC7A5P1Q8MH63 180 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 RCBTB1Q8NDN9 531 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 OR51T1Q8NGJ9 327 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 CXXC1Q9P0U4 656 aaPredicted RBP17.08■□□□□ 0.32
COL5A3-201ENST00000264828 HSPE1-MOB4S4R3N1 261 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 OR6C6A6NF89 314 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 AGPAT2O15120 278 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 APCDD1Q8J025 514 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 ESX1Q8N693 406 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 CNOT9Q92600 299 aaKnown RBP17.08■□□□□ 0.32
COL5A3-201ENST00000264828 WDR92Q96MX6 357 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 XYLT2Q9H1B5 865 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 IGSF5Q9NSI5 407 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 PCTPQ9UKL6 214 aa17.08■□□□□ 0.32
COL5A3-201ENST00000264828 MAGED1Q9Y5V3 778 aaPredicted RBP17.08■□□□□ 0.32
COL5A3-201ENST00000264828 LAMB4A4D0S4 1761 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 FUOMA2VDF0 154 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 M0R3H8 397 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 CLCN2P51788 898 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 KCTD20Q7Z5Y7 419 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 NAGSQ8N159 534 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 TOR1AIP2Q8NFQ8 470 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 SGCZQ96LD1 299 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 CNTNAP3BQ96NU0 1288 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 PRDM9Q9NQV7 894 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 TMPRSS11EQ9UL52 423 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 SSX4O60224 188 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 CTXN1P60606 82 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 AKR1C8PQ5T2L2 129 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 ABHD11Q8NFV4 315 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 OR4D6Q8NGJ1 314 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 SPRYD4Q8WW59 207 aaPredicted RBP17.07■□□□□ 0.32
COL5A3-201ENST00000264828 CWH43Q9H720 699 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 OR1A2Q9Y585 309 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 FAM227AF5H4B4 570 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 F5H5P2 479 aa17.07■□□□□ 0.32
COL5A3-201ENST00000264828 SNNO75324 88 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms