RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 OR6C4Q8NGE1 309 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 OR4K13Q8NH42 304 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 RLN3Q8WXF3 142 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 FKBP10Q96AY3 582 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 SCN9AQ15858 1988 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 OR6C70A6NIJ9 312 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 FRS3O43559 492 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 CSF2P04141 144 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 EN2P19622 333 aaPredicted RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 RPL34P49207 117 aaKnown RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 CYP4V2Q6ZWL3 525 aaPredicted RBP13.24□□□□□ -0.29
CDH3-201ENST00000264012 IQCF2Q8IXL9 164 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 SLC22A8Q8TCC7 542 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 FRMD6Q96NE9 622 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 HOXD1Q9GZZ0 328 aa13.24□□□□□ -0.29
CDH3-201ENST00000264012 SGK494L7N484 410 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 OR7A17O14581 309 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 GM2AP17900 193 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 CCNOP22674 350 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 TACR1P25103 407 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 IMPA1P29218 277 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 CDKN2CP42773 168 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 CDK5R2Q13319 367 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 OTUD1Q5VV17 481 aaPredicted RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 SBSNQ6UWP8 590 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 TMEM41AQ96HV5 264 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 PRSS16Q9NQE7 514 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 SIPA1L3O60292 1781 aaPredicted RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 GABBR2O75899 941 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 H2BFMP0C1H6 154 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 F3P13726 295 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 PGFP49763 221 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 NFATC4Q14934 902 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 GGTA1PQ4G0N0 100 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 GLT8D1Q68CQ7 371 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 INSM2Q96T92 566 aaPredicted RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 CNN2Q99439 309 aaKnown RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 SMURF1Q9HCE7 757 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 RXFP3Q9NSD7 469 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 CNIH4Q9P003 139 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 BAIAP2Q9UQB8 552 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 OR14I1A6ND48 311 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 LRRN3E7EW58 273 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 NPIPA2E9PIF3 369 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 NPIPA3F8WFD2 350 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 FOXD2O60548 495 aaPredicted RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 SLC19A2O60779 497 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 KDM4BO94953 1096 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 FOSL2P15408 326 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 MMP12P39900 470 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 RAB2AP61019 212 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 TRA2BP62995 288 aaKnown RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 PHC1P78364 1004 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 MAD2L1BPQ15013 274 aaPredicted RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 GPR149Q86SP6 731 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 TANKQ92844 425 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 ZNF597Q96LX8 424 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 WDR77Q9BQA1 342 aaPredicted RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 LRRN3Q9H3W5 708 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 STARD5Q9NSY2 213 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 CPNE7Q9UBL6 633 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 CA5BQ9Y2D0 317 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 MAP1BP46821 2468 aaKnown RBP13.23□□□□□ -0.29
CDH3-201ENST00000264012 TRBV2A0A0J9YWF9 115 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 PVRP15151 417 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 GRPRP30550 384 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 KCNJ5P48544 419 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 FAM69BQ5VUD6 431 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 IL22RA1Q8N6P7 574 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 NAXEQ8NCW5 288 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 OR4C15Q8NGM1 316 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 OR5K2Q8NHB8 316 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 TFAP2CQ92754 450 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 ISL2Q96A47 359 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 SAMD8Q96LT4 415 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 OR1F2PQ96R84 312 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 PINK1Q9BXM7 581 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 TRPV4Q9HBA0 871 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 ZNF69Q9UC07 566 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 STUB1Q9UNE7 303 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 MEMO1Q9Y316 297 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 PCDHA9Q9Y5H5 950 aa13.23□□□□□ -0.29
CDH3-201ENST00000264012 CD8B2A6NJW9 211 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 VSTM2BA6NLU5 285 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 CASC3O15234 703 aaKnown RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 FARS2O95363 451 aaKnown RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 YES1P07947 543 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 CD8BP10966 210 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 NCS1P62166 190 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ACTA2P62736 377 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ACTG2P63267 376 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 SGCAQ16586 387 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 HDHD5Q9BXW7 423 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ZNF717Q9BY31 904 aaPredicted RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 LHPPQ9H008 270 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 FAIMQ9NVQ4 179 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 MAGED1Q9Y5V3 778 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms