RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 OR8J1Q8NGP2 316 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 NDNFQ8TB73 568 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 TREX2Q9BQ50 279 aaPredicted RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 TANC1Q9C0D5 1861 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 TLX2O43763 284 aaPredicted RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 TMPRSS11DO60235 418 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 TPPPO94811 219 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 C1QCP02747 245 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 CERS1P27544 350 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 C21orf33P30042 268 aaPredicted RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 ANKRD53Q8N9V6 530 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 MMP27Q9H306 513 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 CTBSQ01459 385 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 ST3GAL3Q11203 375 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 IL18Q14116 193 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 FGFBP1Q14512 234 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 DUSP7Q16829 419 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 KLHL22Q53GT1 634 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 TAF8Q7Z7C8 310 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 HMGN2P46Q86SG4 172 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 OR4K14Q8NGD5 310 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 NACC2Q96BF6 587 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 TMEM80Q96HE8 168 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 PPIL3Q9H2H8 161 aaKnown RBP15.36■□□□□ 0.05
CTCF-201ENST00000264010 ACER3Q9NUN7 267 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 F5P12259 2224 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 M0R3H8 397 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 HMGN2P05204 90 aaKnown RBP15.36■□□□□ 0.05
CTCF-201ENST00000264010 POLR2CP19387 275 aaPredicted RBP15.36■□□□□ 0.05
CTCF-201ENST00000264010 PAICSP22234 425 aaKnown RBP15.36■□□□□ 0.05
CTCF-201ENST00000264010 ZNF81P51508 661 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 GINS1Q14691 196 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 EOGTQ5NDL2 527 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 FGD2Q7Z6J4 655 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 OR52L1Q8NGH7 329 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 POLR2J2Q9GZM3 115 aaKnown RBP15.36■□□□□ 0.05
CTCF-201ENST00000264010 GLIPR2Q9H4G4 154 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 DDX31Q9H8H2 851 aaKnown RBP15.36■□□□□ 0.05
CTCF-201ENST00000264010 ADAP2Q9NPF8 381 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 RLIMQ9NVW2 624 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 GSTK1Q9Y2Q3 226 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 PLEKHM1Q9Y4G2 1056 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 LRIT2A6NDA9 550 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 FAM170BA6NMN3 283 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 DRD3P35462 400 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 PIN1Q13526 163 aaPredicted RBP15.36■□□□□ 0.05
CTCF-201ENST00000264010 TRAM2Q15035 370 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 ZNF438Q7Z4V0 828 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 OR2L3Q8NG85 312 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 SFXN5Q8TD22 340 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 TSACCQ96A04 125 aaPredicted RBP15.36■□□□□ 0.05
CTCF-201ENST00000264010 ELSPBP1Q96BH3 223 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 AMDHD1Q96NU7 426 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 MGLLQ99685 303 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 C1QTNF2Q9BXJ5 285 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 COMMD3Q9UBI1 195 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 CFL2Q9Y281 166 aa15.36■□□□□ 0.05
CTCF-201ENST00000264010 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 PRSS38A1L453 326 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 M0R129 80 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 SPINT1O43278 529 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 GASTP01350 101 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 LINC00271P0C7V0 271 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 ATP5A1P25705 553 aaKnown RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 AP2S1P53680 142 aaPredicted RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 CLDN2P57739 230 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 RPS7P62081 194 aaKnown RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 ZNHIT3Q15649 155 aaPredicted RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 PARM1Q6UWI2 310 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 ASB18Q6ZVZ8 466 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 USP30Q70CQ3 517 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 OR4K5Q8NGD3 323 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 KAT2AQ92830 837 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 UQCC2Q9BRT2 126 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 RACGAP1Q9H0H5 632 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 LCMT2O60294 686 aaKnown RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 LAMP2P13473 410 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 GADD45AP24522 165 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 BCL6P41182 706 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 MAN2A2P49641 1150 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 ZNF362Q5T0B9 420 aaPredicted RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 B3GNT7Q8NFL0 401 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 DEDD2Q8WXF8 326 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 SLC35B4Q969S0 331 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 TMEM203Q969S6 136 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 C1GALT1C1Q96EU7 318 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 ABCG4Q9H172 646 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 PFDN2Q9UHV9 154 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 PCDHGB1Q9Y5G3 927 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 TNFP01375 233 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 CHMP24386 653 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 TEAD1P28347 426 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 EIPR1Q53HC9 387 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 ANKRD54Q6NXT1 300 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 RANBP3LQ86VV4 465 aaPredicted RBP15.35■□□□□ 0.05
CTCF-201ENST00000264010 HMGB4Q8WW32 186 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 TMCO6Q96DC7 493 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 MYADMQ96S97 322 aa15.35■□□□□ 0.05
CTCF-201ENST00000264010 MND1Q9BWT6 205 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms