RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 RDH16O75452 317 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 WBP4O75554 376 aaKnown RBP12.73□□□□□ -0.37
VMP1-201ENST00000262291 ZIC2O95409 532 aaPredicted RBP12.73□□□□□ -0.37
VMP1-201ENST00000262291 ALOX5P09917 674 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 RHCEP18577 417 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 PPP2R1BP30154 601 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 SEPHS1P49903 392 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 AHSA2Q719I0 299 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 ZNF605Q86T29 641 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 ZNF540Q8NDQ6 660 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 OR6T1Q8NGN1 323 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 OR9A4Q8NGU2 314 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 CDS1Q92903 461 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 HLA-CQ95604 372 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 HSPA12BQ96MM6 686 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 ADAP2Q9NPF8 381 aa12.73□□□□□ -0.37
VMP1-201ENST00000262291 LYARQ9NX58 379 aaKnown RBP12.73□□□□□ -0.37
VMP1-201ENST00000262291 OR5K3A6NET4 321 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 FGF17O60258 216 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 SEC14L2O76054 403 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 FADS2O95864 444 aaKnown RBP12.72□□□□□ -0.37
VMP1-201ENST00000262291 BMP4P12644 408 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 GSTM2P28161 218 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 GSTM5P46439 218 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 CSNK1EP49674 416 aaKnown RBP12.72□□□□□ -0.37
VMP1-201ENST00000262291 RACK1P63244 317 aaKnown RBP12.72□□□□□ -0.37
VMP1-201ENST00000262291 MVKQ03426 396 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 ERV3-1Q14264 604 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 NPTX1Q15818 432 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 NKAIN2Q5VXU1 208 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 OOSP2Q86WS3 158 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 CACTIN-AS1Q8N1I8 211 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 LRRC25Q8N386 305 aaPredicted RBP12.72□□□□□ -0.37
VMP1-201ENST00000262291 CAMKVQ8NCB2 501 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 SETD9Q8NE22 299 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 OR4K14Q8NGD5 310 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 SLC35A4Q96G79 324 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 ZNF354BQ96LW1 612 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 AKIP1Q9NQ31 210 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 DUSP12Q9UNI6 340 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 SNX5Q9Y5X3 404 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 MUC3AQ02505 3323 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 PCDH15Q96QU1 1955 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 KIR2DS5A0A0G2JLQ3 304 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 A0A0G2JNG1 304 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 KIR2DS3K7RE56 304 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 OR10H3O60404 316 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 MED26O95402 600 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 MT-ND2P03891 347 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 DCNP07585 359 aaKnown RBP12.72□□□□□ -0.37
VMP1-201ENST00000262291 SMIM10L1P0DMW3 83 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 PDX1P52945 283 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 CRISP3P54108 245 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 PRR5P85299 388 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 DGCR6Q14129 220 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 KEAP1Q14145 624 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 KIR2DS5Q14953 304 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 EXOSC7Q15024 291 aaKnown RBP12.72□□□□□ -0.37
VMP1-201ENST00000262291 WDR45BQ5MNZ6 344 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 ZC3H14Q6PJT7 736 aaKnown RBP12.72□□□□□ -0.37
VMP1-201ENST00000262291 CCDC103Q8IW40 242 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 SERINC2Q96SA4 455 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 MAP3K3Q99759 626 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 ZNF556Q9HAH1 456 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 NEK6Q9HC98 313 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 C11orf16Q9NQ32 467 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 ABCB10Q9NRK6 738 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 UCKL1Q9NWZ5 548 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 N6AMT1Q9Y5N5 214 aa12.72□□□□□ -0.37
VMP1-201ENST00000262291 NPIPA5A0A0B4J1W7 369 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 CENPVL1A0A0U1RR11 272 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 NPIPA7E9PJI5 369 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 CPNE6O95741 557 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 NPIPA8P0DM63 369 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 BCKDHBP21953 392 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 CD38P28907 300 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 SOX18P35713 384 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 LIMS1P48059 325 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 RFX3P48380 749 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 ABHD13Q7L211 337 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 C16orf62Q7Z3J2 963 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 SLC30A8Q8IWU4 369 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 ARL14Q8N4G2 192 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 OR56A1Q8NGH5 318 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 ZNF764Q96H86 408 aaPredicted RBP12.71□□□□□ -0.37
VMP1-201ENST00000262291 C3orf14Q9HBI5 128 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 HCN3Q9P1Z3 774 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 HCN4Q9Y3Q4 1203 aa12.71□□□□□ -0.37
VMP1-201ENST00000262291 FRYLO94915 3013 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 A0A0A6YYC8 382 aaPredicted RBP12.71□□□□□ -0.38
VMP1-201ENST00000262291 I3L1I5 382 aaPredicted RBP12.71□□□□□ -0.38
VMP1-201ENST00000262291 CCRL2O00421 344 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 SNPHO15079 494 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 PDE9AO76083 593 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 NT5EP21589 574 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 AVPR1BP47901 424 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 GFERP55789 205 aa12.71□□□□□ -0.38
VMP1-201ENST00000262291 MAT1AQ00266 395 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms