RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 RHAGQ02094 409 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 MLC1Q15049 377 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 AGERQ15109 404 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 LCN1P1Q5VSP4 162 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 ZNF354BQ96LW1 612 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 MIXL1Q9H2W2 232 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 KLHL31Q9H511 634 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 CLN6Q9NWW5 311 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 KCNK6Q9Y257 313 aa21.26■□□□□ 0.99
MCF2L-201ENST00000261963 RANBP2P49792 3224 aaKnown RBP21.26■□□□□ 0.99
MCF2L-201ENST00000261963 LRIT2A6NDA9 550 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 C4orf51C9J302 202 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 PRKRAO75569 313 aaKnown RBP21.25■□□□□ 0.99
MCF2L-201ENST00000261963 CA3P07451 260 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 CTRB1P17538 263 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 CRYBB2P43320 205 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 GSTM5P46439 218 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 NDUFAF5Q5TEU4 345 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 CTRB2Q6GPI1 263 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 DEF8Q6ZN54 512 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 OR5D16Q8NGK9 328 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 AMDHD1Q96NU7 426 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 C11orf16Q9NQ32 467 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 C12orf4Q9NQ89 552 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 IMP3Q9NV31 184 aaKnown RBP21.25■□□□□ 0.99
MCF2L-201ENST00000261963 SLC23A1Q9UHI7 598 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 ACAD8Q9UKU7 415 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 STUB1Q9UNE7 303 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 PLEKHM1Q9Y4G2 1056 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 A0A1W2PP55 124 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 SLC28A2O43868 658 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 PDGFAP04085 211 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 SSR2P43308 183 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 RAB28P51157 221 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.25■□□□□ 0.99
MCF2L-201ENST00000261963 FAM109BQ6ICB4 259 aaPredicted RBP21.25■□□□□ 0.99
MCF2L-201ENST00000261963 HDDC3Q8N4P3 179 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 TRMT61AQ96FX7 289 aaKnown RBP21.25■□□□□ 0.99
MCF2L-201ENST00000261963 FUZQ9BT04 418 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 PLA2G2FQ9BZM2 168 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 OR51I1Q9H343 314 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 TRIM45Q9H8W5 580 aaPredicted RBP21.25■□□□□ 0.99
MCF2L-201ENST00000261963 SFXN1Q9H9B4 322 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 GDE1Q9NZC3 331 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 TMCC3Q9ULS5 477 aa21.25■□□□□ 0.99
MCF2L-201ENST00000261963 A0A1W2PQL4 384 aaPredicted RBP21.24■□□□□ 0.99
MCF2L-201ENST00000261963 GPR89AB7ZAQ6 455 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 MPZL2O60487 215 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 TSPAN9O75954 239 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 OR7A10O76100 309 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 SOX14O95416 240 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 GPR89BP0CG08 455 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 OSMP13725 252 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 HOXB3P14651 431 aaPredicted RBP21.24■□□□□ 0.99
MCF2L-201ENST00000261963 POU3F3P20264 500 aaPredicted RBP21.24■□□□□ 0.99
MCF2L-201ENST00000261963 BCL6P41182 706 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 MAP2K3P46734 347 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 TRA2BP62995 288 aaKnown RBP21.24■□□□□ 0.99
MCF2L-201ENST00000261963 MXD1Q05195 221 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 OLIG3Q7RTU3 272 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.24■□□□□ 0.99
MCF2L-201ENST00000261963 FAM46DQ8NEK8 389 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 MACROD1Q9BQ69 325 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 SSR3Q9UNL2 185 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 PROM1O43490 865 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 H1F0P07305 194 aaKnown RBP21.24■□□□□ 0.99
MCF2L-201ENST00000261963 MAB21L1Q13394 359 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 ILKQ13418 452 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 DCST1Q5T197 706 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 PXDC1Q5TGL8 231 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 WDR53Q7Z5U6 358 aaPredicted RBP21.24■□□□□ 0.99
MCF2L-201ENST00000261963 OR8H1Q8NGG4 311 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 DNAJA4Q8WW22 397 aaPredicted RBP21.24■□□□□ 0.99
MCF2L-201ENST00000261963 SLC25A46Q96AG3 418 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 ZNF607Q96SK3 696 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 WBP1LQ9NX94 342 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 SEC14L3Q9UDX4 400 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 MGAT4BQ9UQ53 548 aa21.24■□□□□ 0.99
MCF2L-201ENST00000261963 HYKKA2RU49 373 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 SMLR1H3BR10 107 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 CDRT1O95170 752 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 PTGER1P34995 402 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 FEN1P39748 380 aaKnown RBP21.23■□□□□ 0.99
MCF2L-201ENST00000261963 SLC9A3P48764 834 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 POU6F2P78424 691 aaPredicted RBP21.23■□□□□ 0.99
MCF2L-201ENST00000261963 PGBD2Q6P3X8 592 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 SZRD1Q7Z422 152 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 OR4M2Q8NGB6 313 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 KIAA1143Q96AT1 154 aaPredicted RBP21.23■□□□□ 0.99
MCF2L-201ENST00000261963 MSLNLQ96KJ4 702 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 SLC35G5Q96KT7 338 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 IL4I1Q96RQ9 567 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 SLC35C2Q9NQQ7 365 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 SEMA3GQ9NS98 782 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 P2RX2Q9UBL9 471 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 NDOR1Q9UHB4 597 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 GOLGA4Q13439 2230 aaKnown RBP21.23■□□□□ 0.99
MCF2L-201ENST00000261963 REV3LO60673 3130 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 GLOD5A6NK44 160 aa21.23■□□□□ 0.99
MCF2L-201ENST00000261963 TLR4O00206 839 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms