RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 DUSP2Q05923 314 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 CCDC85BQ15834 202 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-201ENST00000261693 FNDC3BQ53EP0 1204 aaKnown RBP18.18■□□□□ 0.5
SCARB1-201ENST00000261693 BBS1Q8NFJ9 593 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 JPH3Q8WXH2 748 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-201ENST00000261693 KIAA1143Q96AT1 154 aaPredicted RBP18.18■□□□□ 0.5
SCARB1-201ENST00000261693 OTULINQ96BN8 352 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 LRRC3BQ96PB8 259 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 SLC38A2Q96QD8 506 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 XKR8Q9H6D3 395 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 TMA7Q9Y2S6 64 aaKnown RBP18.18■□□□□ 0.5
SCARB1-201ENST00000261693 EXOSC1Q9Y3B2 195 aaKnown RBP18.18■□□□□ 0.5
SCARB1-201ENST00000261693 FAM240BA0A1B0GVZ2 78 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 A0A1W2PPV9 198 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 FAM25AB3EWG3 89 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 FAM25CB3EWG5 89 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 FAM25GB3EWG6 89 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 PRRT4C9JH25 899 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 ALX3O95076 343 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 PPM1AP35813 382 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 CTBP2P56545 445 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 CCDC58Q4VC31 144 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 PIP5KL1Q5T9C9 394 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 TMEM107Q6UX40 140 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 LYPD8Q6UX82 237 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 VRK2Q86Y07 508 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 SFTPA1Q8IWL2 248 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 DTX3Q8N9I9 347 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 LINC01555Q8NAE3 123 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 TMEM145Q8NBT3 493 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 BBS10Q8TAM1 723 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 NEIL3Q8TAT5 605 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 UPRTQ96BW1 309 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 RIPOR3Q96MK2 946 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 SEMA4GQ9NTN9 838 aa18.18■□□□□ 0.5
SCARB1-201ENST00000261693 MRPS18AQ9NVS2 196 aaKnown RBP18.18■□□□□ 0.5
SCARB1-201ENST00000261693 TRPM6Q9BX84 2022 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 SCN3AQ9NY46 2000 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 LOC102723532A0A0G2JNH3 316 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 HOXB3P14651 431 aaPredicted RBP18.17■□□□□ 0.5
SCARB1-201ENST00000261693 FGF9P31371 208 aaPredicted RBP18.17■□□□□ 0.5
SCARB1-201ENST00000261693 SNRPD2P62316 118 aaKnown RBP18.17■□□□□ 0.5
SCARB1-201ENST00000261693 UBE3AQ05086 875 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 ZNF697Q5TEC3 545 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 CACUL1Q86Y37 369 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 LINC00471Q8N535 108 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 SPATA5L1Q9BVQ7 753 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 DDX31Q9H8H2 851 aaKnown RBP18.17■□□□□ 0.5
SCARB1-201ENST00000261693 ACOXLQ9NUZ1 547 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 RBFOX1Q9NWB1 397 aaKnown RBP18.17■□□□□ 0.5
SCARB1-201ENST00000261693 IRAK3Q9Y616 596 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 A0A0C4DFX4 3053 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 A0A0A6YYD5 115 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 LYRM1O43325 122 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 VEGFDO43915 354 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 HLA-DMAP28067 261 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 TAS2R38P59533 333 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 ERVFC1P60507 584 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 FAPQ12884 760 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 DUSP6Q16828 381 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 ZNF311Q5JNZ3 666 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 RRM2BQ7LG56 351 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 ZNF485Q8NCK3 441 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 SUN3Q8TAQ9 357 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 MENTQ9BUN1 341 aa18.17■□□□□ 0.5
SCARB1-201ENST00000261693 TRDV1A0A1B0GX56 115 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 ANTXRLA6NF34 631 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 GABRPO00591 440 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 SLC2A10O95528 541 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 PCCBP05166 539 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 PRKAR1AP10644 381 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 NTSP30990 170 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 TRHRP34981 398 aaPredicted RBP18.16■□□□□ 0.5
SCARB1-201ENST00000261693 TRIM23P36406 574 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 GPR4P46093 362 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 CLCNKAP51800 687 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 NOGQ13253 232 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 WSCD2Q2TBF2 565 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 C9orf64Q5T6V5 341 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 PLPP4Q5VZY2 271 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 CD200R1LQ6Q8B3 271 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 SLC39A5Q6ZMH5 540 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 ANKRD33Q7Z3H0 272 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 OR4Q3Q8NH05 313 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 OR8K5Q8NH50 307 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 GNPDA2Q8TDQ7 276 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 TMEM39AQ9NV64 488 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 ISM1B1AKI9 464 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 C4orf51C9J302 202 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 ERVH48-1M5A8F1 160 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 MAN2B1O00754 1011 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 AKR7A2O43488 359 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 LATO43561 262 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 HCN1O60741 890 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 ERGP11308 486 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 ACP5P13686 325 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 ATP6V1E1P36543 226 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 INPP1P49441 399 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 EVX1P49640 407 aa18.16■□□□□ 0.5
SCARB1-201ENST00000261693 CSNK1G2P78368 415 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms