RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZIC4Q8N9L1 334 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 PCYOX1LQ8NBM8 494 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 RAB8BQ92930 207 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 MRGPRFQ96AM1 343 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 TMEM38AQ9H6F2 299 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 COQ10BQ9H8M1 238 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ACTR8Q9H981 624 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SEMA4GQ9NTN9 838 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SNX5Q9Y5X3 404 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 B2RBV5 119 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ANPEPP15144 967 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ENGP17813 658 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 PIK3CBP42338 1070 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 GTF2A1P52655 376 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 RPL38P63173 70 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 RPP38P78345 283 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 MRPS22P82650 360 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CYP4F3Q08477 520 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SKP2Q13309 424 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF324BQ6AW86 544 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CYP2R1Q6VVX0 501 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 MTSS1LQ765P7 747 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 LRRC70Q7Z2Q7 622 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 FGFBP3Q8TAT2 258 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 EXT2Q93063 718 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SPDL1Q96EA4 605 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CCT7Q99832 543 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC26A1Q9H2B4 701 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 DNAJB12Q9NXW2 375 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 GNPTGQ9UJJ9 305 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 KLHDC2Q9Y2U9 406 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CACNA1BQ00975 2339 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CCDC168Q8NDH2 2452 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SYNDIG1LA6NDD5 238 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 WWP2O00308 870 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 EPN2O95208 641 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ZBTB11O95625 1053 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ANP32DO95626 131 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 IL10P22301 178 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 MC3RP41968 323 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 OR1D4P47884 311 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 FBXW4P57775 412 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 STXBP1P61764 594 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 POLR2LP62875 67 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 TXNL4AP83876 142 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 PRKAA1Q13131 559 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 MRNIPQ6NTE8 343 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 AMIGO2Q86SJ2 522 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SERPINA11Q86U17 422 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 OR9Q2Q8NGE9 314 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CEP70Q8NHQ1 597 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 PIK3R3Q92569 461 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CMTM7Q96FZ5 175 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 C12orf66Q96MD2 445 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 RBCK1Q9BYM8 510 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 IL1RAPQ9NPH3 570 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 KLQ9UEF7 1012 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 OAZ3Q9UMX2 235 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 MRPS17Q9Y2R5 130 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 A0A087WUU8 490 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 A0A0G2JK05 382 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 TRBC2A0A5B9 178 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 H3BM21 787 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 PSMD12O00232 456 aaPredicted RBP5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 SIAH2O43255 324 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 ZIC3O60481 467 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 ERN1O75460 977 aaKnown RBP5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 TIPRLO75663 272 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 LDOC1O95751 146 aaPredicted RBP5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 TFP02787 698 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 HMGN2P05204 90 aaKnown RBP5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 CXCR2P25025 360 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 HTR1EP28566 365 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 MAGEB1P43366 347 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 YPEL5P62699 121 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 NRF1Q16656 503 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 LINC00303Q3SY05 128 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 FAM92BQ6ZTR7 304 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 RRM2BQ7LG56 351 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 TMPRSS11BQ86T26 416 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 VRK2Q86Y07 508 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 MARVELD2Q8N4S9 558 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 ARIH2OSQ8N7S6 290 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 C16orf52Q8NHV5 167 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 CSGALNACT1Q8TDX6 532 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC26A7Q8TE54 656 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 SIGLEC12Q96PQ1 595 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 WDR41Q9HAD4 459 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 NOX3Q9HBY0 568 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 SYTL2Q9HCH5 934 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 MOSPD1Q9UJG1 213 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 PCDHB3Q9Y5E6 796 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 MAGEA13PA6NCF6 341 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 E9PI62 339 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 STK25O00506 426 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 ANKRD34CP0C6C1 535 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 MATN1P21941 496 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 PRDX6P30041 224 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 ARFIP1P53367 373 aa5.15□□□□□ -1.58
TOPBP1-201ENST00000260810 LGALS3BPQ08380 585 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms