RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ZNF675Q8TD23 568 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF764Q96H86 408 aaPredicted RBP15.52■□□□□ 0.07
SDCBP-201ENST00000260130 MARK4Q96L34 752 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 RASL10BQ96S79 203 aa15.52■□□□□ 0.07
SDCBP-201ENST00000260130 TRIM45Q9H8W5 580 aaPredicted RBP15.52■□□□□ 0.07
SDCBP-201ENST00000260130 CPAMD8Q8IZJ3 1885 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 ACOT8O14734 319 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 PRAMEF2O60811 474 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 PGM3O95394 542 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 SOX18P35713 384 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 TLE1Q04724 770 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 MPEG1Q2M385 716 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 TRMT12Q53H54 448 aaKnown RBP15.51■□□□□ 0.07
SDCBP-201ENST00000260130 RPUSD3Q6P087 351 aaKnown RBP15.51■□□□□ 0.07
SDCBP-201ENST00000260130 OR9A2Q8NGT5 310 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 PPCDCQ96CD2 204 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 ASB9Q96DX5 294 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 MTERF3Q96E29 417 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF696Q9H7X3 374 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 SUCOQ9UBS9 1254 aaKnown RBP15.51■□□□□ 0.07
SDCBP-201ENST00000260130 NEURL1O76050 574 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 NTSP30990 170 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 PDE7AQ13946 482 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 PTGR1Q14914 329 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 EBPQ15125 230 aaKnown RBP15.51■□□□□ 0.07
SDCBP-201ENST00000260130 INPP5JQ15735 1006 aaPredicted RBP15.51■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF628Q5EBL2 1059 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 ANKRD26P1Q6NSI1 321 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 LARP4Q71RC2 724 aaKnown RBP eCLIP15.51■□□□□ 0.07
SDCBP-201ENST00000260130 R3HCC1LQ7Z5L2 792 aaKnown RBP15.51■□□□□ 0.07
SDCBP-201ENST00000260130 FAM9CQ8IZT9 166 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 RNF148Q8N7C7 305 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 MDS2Q8NDY4 140 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 GAL3ST4Q96RP7 486 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 PKP2Q99959 881 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 WWTR1Q9GZV5 400 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 ASIC5Q9NY37 505 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 UBAP1Q9NZ09 502 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 ADA2Q9NZK5 511 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 SH3BP4Q9P0V3 963 aa15.51■□□□□ 0.07
SDCBP-201ENST00000260130 C2orf92A0A1B0GVN3 265 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 G6PDP11413 515 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 ETS2P15036 469 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 CD46P15529 392 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 PCSK2P16519 638 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 MSX2P35548 267 aaPredicted RBP15.5■□□□□ 0.07
SDCBP-201ENST00000260130 NCBP2P52298 156 aaKnown RBP eCLIP15.5■□□□□ 0.07
SDCBP-201ENST00000260130 PSME3P61289 254 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 SQLEQ14534 574 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 EXOSC7Q15024 291 aaKnown RBP15.5■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF766Q5HY98 468 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 LILRA2Q8N149 483 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 CISD2Q8N5K1 135 aaKnown RBP15.5■□□□□ 0.07
SDCBP-201ENST00000260130 CPT1CQ8TCG5 803 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 ASB15Q8WXK1 588 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 KAT2AQ92830 837 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 CNBD2Q96M20 576 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 PCDHGB6Q9Y5F9 930 aa15.5■□□□□ 0.07
SDCBP-201ENST00000260130 PRRC2CQ9Y520 2896 aaKnown RBP15.5■□□□□ 0.07
SDCBP-201ENST00000260130 H0YJX3 145 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 CBX7O95931 251 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 LBPP18428 481 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 HPCAL1P37235 193 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 RPL3P39023 403 aaKnown RBP15.49■□□□□ 0.07
SDCBP-201ENST00000260130 TRIM25Q14258 630 aaKnown RBP15.49■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF385BQ569K4 471 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF227Q86WZ6 799 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 SIMC1Q8NDZ2 872 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 C16orf52Q8NHV5 167 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 SNRNP40Q96DI7 357 aaKnown RBP15.49■□□□□ 0.07
SDCBP-201ENST00000260130 AMDHD1Q96NU7 426 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 GLIPR2Q9H4G4 154 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 PTTG2Q9NZH5 202 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 ATP6V1HQ9UI12 483 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 CFL2Q9Y281 166 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 SCAMP2O15127 329 aaKnown RBP15.49■□□□□ 0.07
SDCBP-201ENST00000260130 PDPK1O15530 556 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF354AO60765 605 aaPredicted RBP15.49■□□□□ 0.07
SDCBP-201ENST00000260130 TFAP2AP05549 437 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 DDX5P17844 614 aaKnown RBP15.49■□□□□ 0.07
SDCBP-201ENST00000260130 SOX3P41225 446 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 ADRM1Q16186 407 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 PRR30Q53SZ7 412 aaPredicted RBP15.49■□□□□ 0.07
SDCBP-201ENST00000260130 HLA-DQA1Q5Y7H0 255 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 SLC25A25Q6KCM7 469 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 IL20RBQ6UXL0 311 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 GK5Q6ZS86 529 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 GPALPP1Q8IXQ4 340 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 CYP4Z2PQ8N1L4 340 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 SLC15A4Q8N697 577 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 OR52R1Q8NGF1 315 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 TP53INP1Q96A56 240 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 C5orf34Q96MH7 638 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 KLHL1Q9NR64 748 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 ERVK-11Q9UQG0 969 aa15.49■□□□□ 0.07
SDCBP-201ENST00000260130 A8MVJ9 347 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 PLOD3O60568 738 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 SLC25A12O75746 678 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 SLITRK5O94991 958 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 OR6B1O95007 311 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms