RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 MBD1Q9UIS9 605 aaPredicted RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 MFSD2BA6NFX1 497 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 ATG13O75143 517 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 SLCO2B1O94956 709 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 SOX30O94993 753 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 H2AFB2P0C5Z0 115 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 GIFP27352 417 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 GKP32189 559 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 THPOP40225 353 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 CSKP41240 450 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 SLC6A11P48066 632 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 SRP9P49458 86 aaKnown RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 TPMTP51580 245 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 CDH11P55287 796 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 BDH1Q02338 343 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 RPL6Q02878 288 aaKnown RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 CRYZQ08257 329 aaKnown RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 INSL4Q14641 139 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 ST3GAL2Q16842 350 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 FAM110CQ1W6H9 321 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 SLCO4C1Q6ZQN7 724 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 OVCH2Q7RTZ1 564 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 FTMTQ8N4E7 242 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 SAMD12Q8N8I0 201 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 FBXO15Q8NCQ5 510 aaPredicted RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 OR6M1Q8NGM8 313 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 OR2T35Q8NGX2 323 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 LILRB1Q8NHL6 650 aaPredicted RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 DACT3Q96B18 629 aaPredicted RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 SCRN2Q96FV2 425 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 LINC00052Q96N35 136 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 ZNF436Q9C0F3 470 aaPredicted RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 SLC6A16Q9GZN6 736 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 TMEM168Q9H0V1 697 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 POMT2Q9UKY4 750 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 ZFR2Q9UPR6 939 aaKnown RBP10.84□□□□□ -0.67
TROAP-201ENST00000257909 LIPT1Q9Y234 373 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 GPR52Q9Y2T5 361 aa10.84□□□□□ -0.67
TROAP-201ENST00000257909 FRMPD3Q5JV73 1810 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 ANKDD1BA6NHY2 528 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 VNN2O95498 520 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 CATP04040 527 aaKnown RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 IRF1P10914 325 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 RNF144AP50876 292 aaPredicted RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 VSX2P58304 361 aaPredicted RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 CNTN1Q12860 1018 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 TUSC1Q2TAM9 212 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 SPDYE7PQ495Y7 208 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 SERPINA13PQ6UXR4 307 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 WASH2PQ6VEQ5 465 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 TFAP2EQ6VUC0 442 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 BTN2A1Q7KYR7 527 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 TMPRSS11BQ86T26 416 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 OR8D4Q8NGM9 314 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 OR56B4Q8NH76 319 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 RPLP0P6Q8NHW5 317 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 SPRYD4Q8WW59 207 aaPredicted RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 OVCA2Q8WZ82 227 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 PTP4A1Q93096 173 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 FBXW5Q969U6 566 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 PTPN18Q99952 460 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 DPYSL5Q9BPU6 564 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 RSPO3Q9BXY4 272 aaPredicted RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 LDAHQ9H6V9 325 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 CD93Q9NPY3 652 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 DMRT3Q9NQL9 472 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 EXOGQ9Y2C4 368 aaKnown RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 ZNF840PA6NDX5 716 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 ANHXE9PGG2 379 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 MMP20O60882 483 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 UBXN7O94888 489 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 IGSF6O95976 241 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 IGHA1P01876 353 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 KELP23276 732 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 PTSQ03393 145 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 OPCMLQ14982 345 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 PRSS53Q2L4Q9 553 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 VASNQ6EMK4 673 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 B3GLCTQ6Y288 498 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 NR2C2APQ86WQ0 139 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 CMIPQ8IY22 773 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 MORN4Q8NDC4 146 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 OR52H1Q8NGJ2 320 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 WDR48Q8TAF3 677 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 C2orf15Q8WU43 125 aaKnown RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 NEIL2Q969S2 332 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 ALG14Q96F25 216 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 ABHD1Q96SE0 405 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 PLA2G12AQ9BZM1 189 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 SPRTNQ9H040 489 aaPredicted RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 PPIEQ9UNP9 301 aaKnown RBP10.83□□□□□ -0.68
TROAP-201ENST00000257909 TMEM5Q9Y2B1 443 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 CKAP5Q14008 2032 aa10.83□□□□□ -0.68
TROAP-201ENST00000257909 DOCK6Q96HP0 2047 aa10.82□□□□□ -0.68
TROAP-201ENST00000257909 RNF13O43567 381 aa10.82□□□□□ -0.68
TROAP-201ENST00000257909 IL3P08700 152 aa10.82□□□□□ -0.68
TROAP-201ENST00000257909 DRD2P14416 443 aa10.82□□□□□ -0.68
TROAP-201ENST00000257909 F8A1P23610 371 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms