RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 TGM4P49221 684 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 DUSP2Q05923 314 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 SCN1BQ07699 218 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 HNRNPA0Q13151 305 aaKnown RBP15.42■□□□□ 0.06
HOXD3-201ENST00000249440 GPR50Q13585 617 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 TPBGQ13641 420 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 UAP1L1Q3KQV9 507 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 MINDY4Q4G0A6 757 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 OR2G6Q5TZ20 316 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 FAM131AQ6UXB0 335 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 HSDL2Q6YN16 418 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 PRICKLE2Q7Z3G6 844 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 UBQLNLQ8IYU4 475 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 HDDC3Q8N4P3 179 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 ANKK1Q8NFD2 765 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 NUP43Q8NFH3 380 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 OR2L3Q8NG85 312 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 GATAD2BQ8WXI9 593 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 HERVK_113Q902F9 699 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 C1GALT1C1Q96EU7 318 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 MSLNLQ96KJ4 702 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 TRMT61BQ9BVS5 477 aaKnown RBP15.42■□□□□ 0.06
HOXD3-201ENST00000249440 RERGLQ9H628 205 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 ABCB9Q9NP78 766 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 CES1P1Q9UKY3 287 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 RBMX2Q9Y388 322 aaKnown RBP15.42■□□□□ 0.06
HOXD3-201ENST00000249440 EXOSC1Q9Y3B2 195 aaKnown RBP15.42■□□□□ 0.06
HOXD3-201ENST00000249440 KCNE3Q9Y6H6 103 aa15.42■□□□□ 0.06
HOXD3-201ENST00000249440 OR52A4PA6NMU1 304 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 A8MU76 341 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 COQ9O75208 318 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 UBXN7O94888 489 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 KAT7O95251 611 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 F3P13726 295 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 HOXB3P14651 431 aaPredicted RBP15.41■□□□□ 0.06
HOXD3-201ENST00000249440 FLYWCH1Q4VC44 716 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 ZNF730Q6ZMV8 503 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 RASSF6Q6ZTQ3 369 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 UFD1Q92890 307 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 ARHGDIGQ99819 225 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 MED18Q9BUE0 208 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 SARGQ9BW04 601 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 RSPH9Q9H1X1 276 aaPredicted RBP15.41■□□□□ 0.06
HOXD3-201ENST00000249440 SLC38A1Q9H2H9 487 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 ANKRD19PQ9H560 264 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 RMI1Q9H9A7 625 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 GSTK1Q9Y2Q3 226 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 GPR52Q9Y2T5 361 aa15.41■□□□□ 0.06
HOXD3-201ENST00000249440 A0A1W2PQL4 384 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 PRICKLE3O43900 615 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 KCNJ13O60928 360 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 AZGP1P25311 298 aaKnown RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 CERS1P27544 350 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 GJA4P35212 333 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 CHRNEQ04844 493 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 GLYR1Q49A26 553 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 DDI2Q5TDH0 399 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 XKRXQ6PP77 449 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 ZNF517Q6ZMY9 492 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 RAB43Q86YS6 212 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 FAM181AQ8N9Y4 354 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 TMEM145Q8NBT3 493 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 TM9SF4Q92544 642 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 AP3S1Q92572 193 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 ELP4Q96EB1 424 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 PRR14Q9BWN1 585 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 BTBD1Q9H0C5 482 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 TRIM45Q9H8W5 580 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 NEK6Q9HC98 313 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 EQTNQ9NQ60 294 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 TIGARQ9NQ88 270 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 KLHL28Q9NXS3 571 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 PLEKHB1Q9UF11 243 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 ZNF221Q9UK13 617 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 STON1Q9Y6Q2 735 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 ZNF780BQ9Y6R6 833 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 C2orf16Q68DN1 1984 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 FABP12A6NFH5 140 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 CPSF4LA6NMK7 179 aaKnown RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 PROM1O43490 865 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 APOL3O95236 402 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 ADH1BP00325 375 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 CHRM5P08912 532 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 CCNYL3P0C7X3 344 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 C5AR1P21730 350 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 SDC2P34741 201 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 MC3RP41968 323 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 WASP42768 502 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 NKX2-5P52952 324 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 RAB8AP61006 207 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 CEBPEQ15744 281 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 MEX3DQ86XN8 651 aaKnown RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 VRK2Q86Y07 508 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 FBXL6Q8N531 539 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 KLK6Q92876 244 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 RFKQ969G6 155 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 ZNF486Q96H40 463 aaPredicted RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 DIRAS2Q96HU8 199 aa15.4■□□□□ 0.06
HOXD3-201ENST00000249440 FAM46AQ96IP4 442 aaKnown RBP15.4■□□□□ 0.06
HOXD3-201ENST00000249440 TEX12Q9BXU0 123 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms