RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 CD27P26842 260 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 CERS1P27544 350 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 POU1F1P28069 291 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 MPIP34949 423 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 RANBP1P43487 201 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 RGS6P49758 472 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 XKP51811 444 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 RPS15AP62244 130 aaKnown RBP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PRR5P85299 388 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 RPL6Q02878 288 aaKnown RBP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 FUT5Q11128 374 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 NDUFA9Q16795 377 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 ARMCX4Q5H9R4 360 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 MEDAGQ5VYS4 303 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 C18orf63Q68DL7 685 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 C19orf48Q6RUI8 117 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 USP43Q70EL4 1123 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 SZRD1Q7Z422 152 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 ZNF554Q86TJ5 538 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 COMTD1Q86VU5 262 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 NT5CQ8TCD5 201 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PATE1Q8WXA2 126 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 NR4A3Q92570 626 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 SLC22A18Q96BI1 424 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 SPACA7Q96KW9 195 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 ZNF681Q96N22 645 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 FNDC11Q9BVV2 318 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PINK1Q9BXM7 581 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 POLR2J3Q9H1A7 115 aaKnown RBP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 MMP27Q9H306 513 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 SYNPO2LQ9H987 977 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PARD6AQ9NPB6 346 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 NCDNQ9UBB6 729 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 FBXW2Q9UKT8 454 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 TDRD6O60522 2096 aaKnown RBP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 SPTBN2O15020 2390 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 SNRNP200O75643 2136 aaKnown RBP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 M0R3H8 397 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 SYT5O00445 386 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 ZW10O43264 779 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 EPPINO95925 133 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 TP53P04637 393 aaPredicted RBP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 BMP4P12644 408 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 CD38P28907 300 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 MAN2A2P49641 1150 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PRKAG1P54619 331 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 DUSP2Q05923 314 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 TARDBPQ13148 414 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PIN1Q13526 163 aaPredicted RBP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 GPR18Q14330 331 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 LASP1Q14847 261 aaKnown RBP11.91□□□□□ -0.5
SNAI1-201ENST00000244050 OCLNQ16625 522 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 ZNF750Q32MQ0 723 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PODNL1Q6PEZ8 512 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 MAMSTRQ6ZN01 415 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 CADM4Q8NFZ8 388 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 OR8J1Q8NGP2 316 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 GAL3ST3Q96A11 431 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 ELP4Q96EB1 424 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PRRC1Q96M27 445 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 MROQ9BYG7 248 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 MIR1-1HGQ9H1L0 117 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 C3orf14Q9HBI5 128 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 POT1Q9NUX5 634 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 RHBDL2Q9NX52 303 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 LIPT1Q9Y234 373 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 IFT52Q9Y366 437 aa11.91□□□□□ -0.5
SNAI1-201ENST00000244050 ARHGEF17Q96PE2 2063 aaPredicted RBP11.9□□□□□ -0.5
SNAI1-201ENST00000244050 KIR2DS5A0A0G2JLQ3 304 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 A0A0G2JNG1 304 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 METTL15A6NJ78 407 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 OR5K4A6NMS3 321 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 KIR2DS3K7RE56 304 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 BTN3A3O00478 584 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 KPNA4O00629 521 aaPredicted RBP11.9□□□□□ -0.5
SNAI1-201ENST00000244050 ENTPD6O75354 484 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 NME6O75414 186 aaPredicted RBP11.9□□□□□ -0.5
SNAI1-201ENST00000244050 MAOBP27338 520 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 FEN1P39748 380 aaKnown RBP11.9□□□□□ -0.5
SNAI1-201ENST00000244050 RAB8AP61006 207 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 FOXD4Q12950 439 aaPredicted RBP11.9□□□□□ -0.5
SNAI1-201ENST00000244050 C1orf61Q13536 156 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 KIR2DS3Q14952 304 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 KIR2DS5Q14953 304 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 NCF4Q15080 339 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 INAQ16352 499 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 SLC25A30Q5SVS4 291 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 RNLSQ5VYX0 342 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 C1orf94Q6P1W5 598 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 CASP12Q6UXS9 341 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 VN1R4Q7Z5H5 301 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 BTLAQ7Z6A9 289 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 MINDY2Q8NBR6 621 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 KBTBD8Q8NFY9 601 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 OR6T1Q8NGN1 323 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 OR10G6Q8NH81 332 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 TRNT1Q96Q11 434 aaKnown RBP11.9□□□□□ -0.5
SNAI1-201ENST00000244050 ROGDIQ9GZN7 287 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 NXF2Q9GZY0 626 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms