RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 PIH1D2Q8WWB5 315 aa18.74■□□□□ 0.59
HOXC13-201ENST00000243056 SCRN2Q96FV2 425 aa18.74■□□□□ 0.59
HOXC13-201ENST00000243056 MRPL48Q96GC5 212 aaKnown RBP18.74■□□□□ 0.59
HOXC13-201ENST00000243056 SENP5Q96HI0 755 aaPredicted RBP18.74■□□□□ 0.59
HOXC13-201ENST00000243056 POLR2J2Q9GZM3 115 aaKnown RBP18.74■□□□□ 0.59
HOXC13-201ENST00000243056 SERHLQ9NQF3 203 aa18.74■□□□□ 0.59
HOXC13-201ENST00000243056 SDHAF3Q9NRP4 125 aa18.74■□□□□ 0.59
HOXC13-201ENST00000243056 SCP2D1Q9UJQ7 156 aa18.74■□□□□ 0.59
HOXC13-201ENST00000243056 HCN2Q9UL51 889 aa18.74■□□□□ 0.59
HOXC13-201ENST00000243056 A0A1B0GVI7 797 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 IGSF6O95976 241 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 CTSLP07711 333 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 PREPP48147 710 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 DEFA5Q01523 94 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 SWI5Q1ZZU3 235 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 TRMT11Q7Z4G4 463 aaKnown RBP18.73■□□□□ 0.59
HOXC13-201ENST00000243056 ANKRD46Q86W74 232 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 OR2T35Q8NGX2 323 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 MOSPD2Q8NHP6 518 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 TMEM163Q8TC26 289 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 NELL2Q99435 816 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 TREX2Q9BQ50 279 aaPredicted RBP18.73■□□□□ 0.59
HOXC13-201ENST00000243056 TRMT61BQ9BVS5 477 aaKnown RBP18.73■□□□□ 0.59
HOXC13-201ENST00000243056 PRDM9Q9NQV7 894 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 ING1Q9UK53 422 aaPredicted RBP18.73■□□□□ 0.59
HOXC13-201ENST00000243056 SULT1A3P0DMM9 295 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 SULT1A4P0DMN0 295 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 PRKAR1BP31321 381 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 BDKRB1P46663 353 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 ZP1P60852 638 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 ABRAXAS2Q15018 415 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 ARMC12Q5T9G4 340 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 WASH2PQ6VEQ5 465 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 RFLNAQ6ZTI6 216 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 STAG3L4Q8TBR4 150 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 AP3S1Q92572 193 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 DPY30Q9C005 99 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 HDHD2Q9H0R4 259 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 SLC22A11Q9NSA0 550 aa18.73■□□□□ 0.59
HOXC13-201ENST00000243056 NPEPPSL1A6NEC2 478 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 C2CD4DB7Z1M9 353 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 ATG12O94817 140 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 RLN2P04090 185 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 ITPKAP23677 461 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 GSTM5P46439 218 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 ALDH9A1P49189 494 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 FGL2Q14314 439 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 ARSIQ5FYB1 569 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 METAP1DQ6UB28 335 aaPredicted RBP18.72■□□□□ 0.59
HOXC13-201ENST00000243056 ALKAL2Q6UX46 152 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 MCATQ8IVS2 390 aaKnown RBP18.72■□□□□ 0.59
HOXC13-201ENST00000243056 OR10G2Q8NGC3 310 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 METTL6Q8TCB7 284 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 SFT2D1Q8WV19 159 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 HSD17B8Q92506 261 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 C7orf34Q96L11 122 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 OR2M2Q96R28 347 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 MND1Q9BWT6 205 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 C1QTNF3Q9BXJ4 246 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 NKX6-2Q9C056 277 aaPredicted RBP18.72■□□□□ 0.59
HOXC13-201ENST00000243056 SEMA4CQ9C0C4 833 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 COL4A3Q01955 1670 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 OR6C65A6NJZ3 312 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 LEFTY1O75610 366 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 CLDN7O95471 211 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 TFPIP10646 304 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 HOXB9P17482 250 aaPredicted RBP18.72■□□□□ 0.59
HOXC13-201ENST00000243056 PTPN6P29350 595 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 LCN1P31025 176 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 SUOXP51687 545 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 SNRPD1P62314 119 aaKnown RBP18.72■□□□□ 0.59
HOXC13-201ENST00000243056 ERVK-25P63136 954 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 SFRP5Q5T4F7 317 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 TPD52L3Q96J77 140 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 CLMPQ9H6B4 373 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 BRD9Q9H8M2 597 aa18.72■□□□□ 0.59
HOXC13-201ENST00000243056 E2F3O00716 465 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 PEX14O75381 377 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 IL6P05231 212 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 CXCL2P19875 107 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 PTAFRP25105 342 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 SELENOPP49908 381 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 SEC13P55735 322 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 AP1S1P61966 158 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 RIPPLY1Q0D2K3 151 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 ST3GAL2Q16842 350 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 DOK6Q6PKX4 331 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 BEST4Q8NFU0 473 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 DDOQ99489 341 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 ADGRE3Q9BY15 652 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 CD207Q9UJ71 328 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 TEX13CA0A0J9YWL9 993 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 NPIPB15A6NHN6 443 aaPredicted RBP18.71■□□□□ 0.59
HOXC13-201ENST00000243056 RAB3BP20337 219 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 KDELR2P33947 212 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 HSPA7P48741 367 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 TSPAN5P62079 268 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 FNDC3BQ53EP0 1204 aaKnown RBP18.71■□□□□ 0.59
HOXC13-201ENST00000243056 PAN3Q58A45 887 aaKnown RBP18.71■□□□□ 0.59
HOXC13-201ENST00000243056 C3orf38Q5JPI3 329 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms