RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 OSMP13725 252 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 UBE2KP61086 200 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 IL13RA1P78552 427 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 BEX5Q5H9J7 111 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 C6orf120Q7Z4R8 191 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 SPARTQ8N0X7 666 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 FBXO22Q8NEZ5 403 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 LUZP4Q9P127 313 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 KIF25Q9UIL4 384 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 IGLV3-22A0A075B6J6 115 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 MEGF11A6BM72 1044 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ZNF30P17039 623 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 SLC2A5P22732 501 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 PPT1P50897 306 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 NFATC2Q13469 925 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 CARD17Q5XLA6 110 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 PRSS55Q6UWB4 352 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 GPR155Q7Z3F1 870 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ALDH16A1Q8IZ83 802 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 RHEBL1Q8TAI7 183 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 C2orf15Q8WU43 125 aaKnown RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ZNF681Q96N22 645 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 SLC38A1Q9H2H9 487 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 NLE1Q9NVX2 485 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 KCNIP1Q9NZI2 227 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 KCNK6Q9Y257 313 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 NPIPA2E9PIF3 369 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 ATP6V1G2-DDX39BF2Z307 99 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 NPIPA3F8WFD2 350 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 NME4O00746 187 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 NPC1O15118 1278 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 MED6O75586 246 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 TMEM225BP0DP42 221 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 AVPI1Q5T686 147 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 AGAP7PQ5VUJ5 663 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 Q6ZVU0 165 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 GAB3Q8WWW8 586 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 FOXRED1Q96CU9 486 aaPredicted RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 PATZ1Q9HBE1 687 aaKnown RBP13.19□□□□□ -0.3
TARDBP-201ENST00000240185 THSD1Q9NS62 852 aa13.19□□□□□ -0.3
TARDBP-201ENST00000240185 EFCAB7A8K855 629 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 MAGEB4O15481 346 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-201ENST00000240185 EMC8O43402 210 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 FADS1O60427 444 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 JRKO75564 520 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 ACTL6BO94805 426 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 TXNDC12O95881 172 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 RAC2P15153 192 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 CD9P21926 228 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 TIGD5Q53EQ6 642 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 TSSK4Q6SA08 328 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 PGAP1Q75T13 922 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 PQLC3Q8N755 202 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 ANKK1Q8NFD2 765 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 OR2T4Q8NH00 348 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 ZBTB8AQ96BR9 441 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 PITX2Q99697 317 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 NOX3Q9HBY0 568 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 PCDHAC2Q9Y5I4 1007 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 C17orf113A0A1B0GUU1 675 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 ANHXE9PGG2 379 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 PRICKLE3O43900 615 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-201ENST00000240185 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 MRPL49Q13405 166 aaKnown RBP13.18□□□□□ -0.3
TARDBP-201ENST00000240185 CMTM1Q8IZ96 169 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 DNAJC22Q8N4W6 341 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 DNAJC5GQ8N7S2 189 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 SLC7A13Q8TCU3 470 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 PUS1Q9Y606 427 aaKnown RBP eCLIP13.18□□□□□ -0.3
TARDBP-201ENST00000240185 UPK3BL1B0FP48 263 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 UPK3BL2E5RIL1 263 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 ACPPP15309 386 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 CBR1P16152 277 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 DCTP40126 519 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 MRPS10P82664 201 aaKnown RBP13.18□□□□□ -0.3
TARDBP-201ENST00000240185 MS4A2Q01362 244 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 GSTM4Q03013 218 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 DBPQ10586 325 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-201ENST00000240185 SLC18B1Q6NT16 456 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 SERPINA12Q8IW75 414 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 CERS5Q8N5B7 392 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 PARP16Q8N5Y8 322 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 RNF128Q8TEB7 428 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 SLC35F5Q8WV83 523 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 HAO2Q9NYQ3 351 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 PRODH2Q9UF12 536 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 IL20RAQ9UHF4 553 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 KLHL21Q9UJP4 597 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 ARGFXA6NJG6 315 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 FANCGO15287 622 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 FBXO24O75426 580 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 APOA2P02652 100 aa13.18□□□□□ -0.3
TARDBP-201ENST00000240185 MT-ND4P03905 459 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms