RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 TRAPPC2P0DI81 140 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 TRAPPC2BP0DI82 140 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 IL12RB1P42701 662 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 MLLT1Q03111 559 aaPredicted RBP17.59■□□□□ 0.41
CPSF3-201ENST00000238112 MLF2Q15773 248 aaPredicted RBP17.59■□□□□ 0.41
CPSF3-201ENST00000238112 MRGPREQ86SM8 312 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 FAM20CQ8IXL6 584 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 ACOT4Q8N9L9 421 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 OR52P1PQ8NH57 321 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 CNRIP1Q96F85 164 aaPredicted RBP17.59■□□□□ 0.41
CPSF3-201ENST00000238112 FAM46AQ96IP4 442 aaKnown RBP17.59■□□□□ 0.41
CPSF3-201ENST00000238112 TRMT61BQ9BVS5 477 aaKnown RBP17.59■□□□□ 0.41
CPSF3-201ENST00000238112 C11orf54Q9H0W9 315 aaPredicted RBP17.59■□□□□ 0.41
CPSF3-201ENST00000238112 WDR26Q9H7D7 661 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 MRPS30Q9NP92 439 aaKnown RBP17.59■□□□□ 0.41
CPSF3-201ENST00000238112 EQTNQ9NQ60 294 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 ASB4Q9Y574 426 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 KCNE3Q9Y6H6 103 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 CKAP5Q14008 2032 aa17.59■□□□□ 0.41
CPSF3-201ENST00000238112 KDM4EB2RXH2 506 aaPredicted RBP17.58■□□□□ 0.41
CPSF3-201ENST00000238112 POLR1CO15160 346 aaPredicted RBP17.58■□□□□ 0.41
CPSF3-201ENST00000238112 FRS3O43559 492 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 CDH11P55287 796 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 FABP5Q01469 135 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 GAB4Q2WGN9 574 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 RASSF6Q6ZTQ3 369 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 VWA5B2Q8N398 1253 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 PIGXQ8TBF5 258 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 TP53INP1Q96A56 240 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 ZNF707Q96C28 371 aaPredicted RBP17.58■□□□□ 0.41
CPSF3-201ENST00000238112 MS4A6EQ96DS6 147 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 OR7D2Q96RA2 312 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 TEX12Q9BXU0 123 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 PRSS16Q9NQE7 514 aa17.58■□□□□ 0.41
CPSF3-201ENST00000238112 CASKO14936 926 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 AIFM1O95831 613 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 LIMS3P0CW19 117 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 LIMS4P0CW20 117 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 CSNK2A2P19784 350 aaPredicted RBP17.58■□□□□ 0.4
CPSF3-201ENST00000238112 DUSP2Q05923 314 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 ST3GAL3Q11203 375 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 ZIC1Q15915 447 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 SLC35F1Q5T1Q4 408 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 ZFP41Q8N8Y5 198 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 RFKQ969G6 155 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 ARHGAP9Q9BRR9 750 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 CRISPLD2Q9H0B8 497 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 GIMAP4Q9NUV9 329 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 ZNF232Q9UNY5 417 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 CLCA2Q9UQC9 943 aa17.58■□□□□ 0.4
CPSF3-201ENST00000238112 C4orf51C9J302 202 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 EMC8O43402 210 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 LATO43561 262 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 CCNYL3P0C7X3 344 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 ATP5A1P25705 553 aaKnown RBP17.57■□□□□ 0.4
CPSF3-201ENST00000238112 FGF9P31371 208 aaPredicted RBP17.57■□□□□ 0.4
CPSF3-201ENST00000238112 SSTR4P31391 388 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 PPP3R1P63098 170 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 CHRNEQ04844 493 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 TGM3Q08188 693 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 MADCAM1Q13477 382 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 ZNF628Q5EBL2 1059 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 ABHD17CQ6PCB6 329 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 LHFPL3Q86UP9 236 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 VRK2Q86Y07 508 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 ARHGDIGQ99819 225 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 RAB11FIP5Q9BXF6 653 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 MBNL1Q9NR56 388 aaKnown RBP17.57■□□□□ 0.4
CPSF3-201ENST00000238112 SEMA4GQ9NTN9 838 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 COMMD3Q9UBI1 195 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 MYO7AQ13402 2215 aa17.57■□□□□ 0.4
CPSF3-201ENST00000238112 GPR89AB7ZAQ6 455 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 GPR89BP0CG08 455 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 PKLRP30613 574 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 MPIP34949 423 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 SLC1A3P43003 542 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 AVPR1BP47901 424 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 C6orf183Q5T699 404 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 C18orf63Q68DL7 685 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 RDH10Q8IZV5 341 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 NUP43Q8NFH3 380 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 OR2L8Q8NGY9 312 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 ENKURQ8TC29 256 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 KLK6Q92876 244 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 FRMD6Q96NE9 622 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 DEPDC7Q96QD5 511 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 TEX101Q9BY14 249 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 SLC38A1Q9H2H9 487 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 IL23AQ9NPF7 189 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 PRDM7Q9NQW5 492 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 CALML5Q9NZT1 146 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 KCNK6Q9Y257 313 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 GPR55Q9Y2T6 319 aaPredicted RBP17.56■□□□□ 0.4
CPSF3-201ENST00000238112 SEC14L5O43304 696 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 CH25HO95992 272 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 HOXB3P14651 431 aaPredicted RBP17.56■□□□□ 0.4
CPSF3-201ENST00000238112 GNSP15586 552 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 MYL9P24844 172 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 MC3RP41968 323 aa17.56■□□□□ 0.4
CPSF3-201ENST00000238112 CAV3P56539 151 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms