RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 AQP11Q8NBQ7 271 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 OR11G2Q8NGC1 345 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 COLEC11Q9BWP8 271 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 ACER3Q9NUN7 267 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 FAM50BQ9Y247 325 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 KCTD3Q9Y597 815 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 SBF1O95248 1867 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 SSC5DA1L4H1 1573 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 ABHD14A-ACY1A0A1B0GW23 586 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 TMEM129A0AVI4 362 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 RFXAPO00287 272 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 CLDN4O14493 209 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 B4GALT5O43286 388 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 HSD3B1P14060 373 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 AKAP5P24588 427 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 FEN1P39748 380 aaKnown RBP12.29□□□□□ -0.44
MSH2-201ENST00000233146 CTSOP43234 321 aaPredicted RBP12.29□□□□□ -0.44
MSH2-201ENST00000233146 NPBWR1P48145 328 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 DGKEP52429 567 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 HMGA2P52926 109 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 PSMA6P60900 246 aaKnown RBP12.29□□□□□ -0.44
MSH2-201ENST00000233146 SELENOWP63302 87 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 TARBP2Q15633 366 aaKnown RBP12.29□□□□□ -0.44
MSH2-201ENST00000233146 IDNKQ5T6J7 187 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 PRICKLE2Q7Z3G6 844 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 NR2C2APQ86WQ0 139 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 CPXM2Q8N436 756 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 RNF149Q8NC42 400 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 WNT2BQ93097 391 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 SLC25A28Q96A46 364 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 MEGF10Q96KG7 1140 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 RHOVQ96L33 236 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 ZDHHC15Q96MV8 337 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.29□□□□□ -0.44
MSH2-201ENST00000233146 ZNF302Q9NR11 478 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 NKIRAS2Q9NYR9 191 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 ZMYM5Q9UJ78 669 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 PPT2Q9UMR5 302 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 FLVCR2Q9UPI3 526 aa12.29□□□□□ -0.44
MSH2-201ENST00000233146 COL14A1Q05707 1796 aaKnown RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 MATN3O15232 486 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 PEX10O60683 326 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 MOCS2O96007 188 aaPredicted RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 PEX11BO96011 259 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 IGHV2-5P01817 119 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 MAPK3P27361 379 aaPredicted RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 RNF144AP50876 292 aaPredicted RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 RPS14P62263 151 aaKnown RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 CAP1Q01518 475 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 C12orf73Q69YU5 71 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 REC114Q7Z4M0 266 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 TCTEX1D2Q8WW35 142 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 SLC2A13Q96QE2 648 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 SLC38A1Q9H2H9 487 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 TMPRSS5Q9H3S3 457 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 NANSQ9NR45 359 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 RBM22Q9NW64 420 aaKnown RBP eCLIP12.28□□□□□ -0.443e-6■■■■□ 26.3
MSH2-201ENST00000233146 TAS2R13Q9NYV9 303 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 A0A1W2PPE3 182 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 PRAMEF25A6NGN4 478 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 GFYI3L273 518 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 GABRPO00591 440 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 GCM2O75603 506 aaPredicted RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 WNT1P04628 370 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 CAP2P40123 477 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 MVDP53602 400 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 SNTB2Q13425 540 aaKnown RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 MRNIPQ6NTE8 343 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 ZNF613Q6PF04 617 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 TRIM46Q7Z4K8 759 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 DCUN1D3Q8IWE4 304 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 CCDC116Q8IYX3 515 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 POMGNT2Q8NAT1 580 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 RNASE11Q8TAA1 199 aaKnown RBP12.28□□□□□ -0.44
MSH2-201ENST00000233146 PNPLA2Q96AD5 504 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 FBXO17Q96EF6 278 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 WNT5BQ9H1J7 359 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 KLHL1Q9NR64 748 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 ZSCAN32Q9NX65 697 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 FBXL3Q9UKT7 428 aa12.28□□□□□ -0.44
MSH2-201ENST00000233146 C5orf58C9J3I9 102 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 FPGTO14772 594 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 EIF4E2O60573 245 aaKnown RBP12.27□□□□□ -0.44
MSH2-201ENST00000233146 MAFKO60675 156 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 STAG3L1P0CL83 205 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 IFNGR1P15260 489 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 CSF2RBP32927 897 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 PRR5P85299 388 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 TAP2Q03519 686 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 ADIGQ0VDE8 80 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 KRT33BQ14525 404 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 IRF4Q15306 451 aa12.27□□□□□ -0.44
MSH2-201ENST00000233146 PCBP2Q15366 365 aaKnown RBP eCLIP12.27□□□□□ -0.445e-9■■■■■ 75.5
MSH2-201ENST00000233146 CYB5R2Q6BCY4 276 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms