RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SERPIND1P05546 499 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 H1F0P07305 194 aaKnown RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 BAMBIQ13145 260 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 MRPL58Q14197 206 aaKnown RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 ETFDHQ16134 617 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 FAM74A3Q4VXF1 159 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 LIPJQ5W064 366 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 WASH2PQ6VEQ5 465 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 ADGRF3Q8IZF5 1079 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 PROKR2Q8NFJ6 384 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 OR8J1Q8NGP2 316 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 C2CD4CQ8TF44 421 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 CREB3L1Q96BA8 519 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 TMEM19Q96HH6 336 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 SHARPINQ9H0F6 387 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 STOX2Q9P2F5 926 aaPredicted RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 B4GALT6Q9UBX8 382 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 SH2B3Q9UQQ2 575 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 TP53BP1Q12888 1972 aaPredicted RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 MYOFQ9NZM1 2061 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 KRBOX1C9JBD0 128 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 LDOC1O95751 146 aaPredicted RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 IL1AP01583 271 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 HOXC8P31273 242 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 CD70P32970 193 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 OPRD1P41143 372 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 MANFP55145 182 aaKnown RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF763Q0D2J5 394 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 CRHR2Q13324 411 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 ADAM15Q13444 863 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 LYPLAL1Q5VWZ2 237 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 RRM2BQ7LG56 351 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 TECPR1Q7Z6L1 1165 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 PM20D2Q8IYS1 436 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 HORMAD2Q8N7B1 307 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 DDOQ99489 341 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 NRTNQ99748 197 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 SLC6A16Q9GZN6 736 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 LDAHQ9H6V9 325 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 EGLN3Q9H6Z9 239 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 RC3H2Q9HBD1 1191 aaKnown RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 SLC25A19Q9HC21 320 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 GPBP1L1Q9HC44 474 aaPredicted RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 NANSQ9NR45 359 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 CUEDC1Q9NWM3 386 aaPredicted RBP13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 ERVK-19Q9WJR5 959 aa13.36□□□□□ -0.27
PCDHB3-201ENST00000231130 SEMA7AO75326 666 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 ZDHHC11BP0C7U3 371 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 CBSLP0DN79 551 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 GJA1P17302 382 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 PSMA3P25788 255 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 PTX3P26022 381 aaPredicted RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 ELAVL4P26378 380 aaKnown RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 GIFP27352 417 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 CBSP35520 551 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 MLLT11Q13015 90 aaPredicted RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 TCTN3Q6NUS6 607 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 GDPGP1Q6ZNW5 385 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 OR4F15Q8NGB8 312 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 EXOSC8Q96B26 276 aaKnown RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 RNFT2Q96EX2 444 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 LIPT1Q9Y234 373 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 FRS3O43559 492 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 SLC28A2O43868 658 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 LPLP06858 475 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 EPHX1P07099 455 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 FNTBP49356 437 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 CTSCP53634 463 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 MED27Q6P2C8 311 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 TPRG1Q6ZUI0 275 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 OXR1Q8N573 874 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 OR5D16Q8NGK9 328 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 NEIL3Q8TAT5 605 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 SLC38A5Q8WUX1 472 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 PELOQ9BRX2 385 aaKnown RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 TINAGL1Q9GZM7 467 aaPredicted RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 GULP1Q9UBP9 304 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 SRRDQ9UH36 339 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 RNASET2O00584 256 aaKnown RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 CKMP06732 381 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 REEP3Q6NUK4 255 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 CHST9Q7L1S5 443 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 OR4D11Q8NGI4 311 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 ARMC5Q96C12 935 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 SECISBP2Q96T21 854 aaKnown RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 IER2Q9BTL4 223 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 SMG9Q9H0W8 520 aaKnown RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 CXorf36Q9H7Y0 433 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 NFKBIL1Q9UBC1 381 aaPredicted RBP13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 GLS2Q9UI32 602 aa13.35□□□□□ -0.27
PCDHB3-201ENST00000231130 DNAH14Q0VDD8 3507 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 MID1O15344 667 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 CA12O43570 354 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 LANCL1O43813 399 aa13.34□□□□□ -0.27
PCDHB3-201ENST00000231130 RAB36O95755 333 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms