RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 VSX2P58304 361 aaPredicted RBP16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 CDK5Q00535 292 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 PDE7AQ13946 482 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 PRSS53Q2L4Q9 553 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 ATP13A5Q4VNC0 1218 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 TMEM240Q5SV17 173 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 HECTD3Q5T447 861 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 PSRC1Q6PGN9 363 aaPredicted RBP16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 CFAP77Q6ZQR2 320 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 LHFPL3Q86UP9 236 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 GPR135Q8IZ08 494 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 WFDC6Q9BQY6 131 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 ZBP1Q9H171 429 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 OSGEPL1Q9H4B0 414 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 YIPF1Q9Y548 306 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 INSL6Q9Y581 213 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 SCN8AQ9UQD0 1980 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 FGF18O76093 207 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 BCHEP06276 602 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 EIF4EP06730 217 aaKnown RBP16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 HMGA1P17096 107 aaKnown RBP16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 CELP19835 753 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 RAB8AP61006 207 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 TAP2Q03519 686 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 MINDY4Q4G0A6 757 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 IL20RBQ6UXL0 311 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 SLC36A4Q6YBV0 504 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 NR2C2APQ86WQ0 139 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 LRRC28Q86X40 367 aaPredicted RBP16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 OR6M1Q8NGM8 313 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 OR2T4Q8NH00 348 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 SMG7Q92540 1137 aaKnown RBP16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 MARC2Q969Z3 335 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 PDXPQ96GD0 296 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 TRMT2BQ96GJ1 504 aaKnown RBP16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 SHARPINQ9H0F6 387 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 SCP2D1Q9UJQ7 156 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 OBSL1O75147 1896 aa16.66■□□□□ 0.26
CDKN1B-201ENST00000228872 M0R233 179 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 CASC3O15234 703 aaKnown RBP16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 HRGP04196 525 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 EPHX1P07099 455 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 MMP11P24347 488 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 NUP62P37198 522 aaPredicted RBP16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 SLC1A3P43003 542 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 PODNL1Q6PEZ8 512 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 SP7Q8TDD2 431 aaPredicted RBP16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 OR4K3Q96R72 315 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 C2orf49Q9BVC5 232 aaPredicted RBP16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 LINC00597Q9H2U6 94 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 SDHAF2Q9NX18 166 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 A0A1W2PRB8 838 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 PCP4L1A6NKN8 68 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 C5orf58C9J3I9 102 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 DVL2O14641 736 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 CORO1AP31146 461 aaKnown RBP16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 RIPPLY1Q0D2K3 151 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 ZNF155Q12901 538 aaPredicted RBP16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 NAE1Q13564 534 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 ST3GAL2Q16842 350 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 TUSC1Q2TAM9 212 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 KIAA1211LQ6NV74 962 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 CD300LDQ6UXZ3 194 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 PRICKLE2Q7Z3G6 844 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 ZER1Q7Z7L7 766 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 TCEAL8Q8IYN2 117 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 MED8Q96G25 268 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 COQ10AQ96MF6 247 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 GKN1Q9NS71 199 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 ACAD8Q9UKU7 415 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 CBLCQ9ULV8 474 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 GPR52Q9Y2T5 361 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 CSNK1G3Q9Y6M4 447 aa16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 ZNF106Q9H2Y7 1883 aaKnown RBP16.65■□□□□ 0.26
CDKN1B-201ENST00000228872 A0A1B0GVC2 190 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 MFSD2BA6NFX1 497 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 A6NIN4 97 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 CTSAP10619 480 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 KELP23276 732 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 RFX3P48380 749 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 PITPNBP48739 271 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 UAP1L1Q3KQV9 507 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 SERPINA13PQ6UXR4 307 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 COMMD6Q7Z4G1 85 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 OR8D4Q8NGM9 314 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 ADAMTS19Q8TE59 1207 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 SLC38A5Q8WUX1 472 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 POF1BQ8WVV4 589 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 GPA33Q99795 319 aa16.64■□□□□ 0.26
CDKN1B-201ENST00000228872 G3V3Q6 166 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 IRF1P10914 325 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 RBMS1P29558 406 aaKnown RBP16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 SMSP52788 366 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 SMIM11AP58511 58 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 RPS26P62854 115 aaKnown RBP16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 GSG1Q2KHT4 349 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 VASNQ6EMK4 673 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 LYPD4Q6UWN0 246 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 HORMAD2Q8N7B1 307 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms