RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 IHHQ14623 411 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 HES5Q5TA89 166 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 SLITRK4Q8IW52 837 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 SYNPOQ8N3V7 929 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 FTMTQ8N4E7 242 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 TRIM43Q96BQ3 446 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 DUS3LQ96G46 650 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 CDADC1Q9BWV3 514 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 C11orf54Q9H0W9 315 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 CXorf36Q9H7Y0 433 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 MKKSQ9NPJ1 570 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 CKAP5Q14008 2032 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 CRYZQ08257 329 aaKnown RBP13□□□□□ -0.33
NFKB1-201ENST00000226574 JAGN1Q8N5M9 183 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 OR56A1Q8NGH5 318 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 OR9A2Q8NGT5 310 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 ADAMTS16Q8TE57 1224 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 CASTOR1Q8WTX7 329 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 MSLNLQ96KJ4 702 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 BCL7BQ9BQE9 202 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 APOC3P02656 99 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 SPNP16150 400 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 ACVR1Q04771 509 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 PDGFRLQ15198 375 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 TP53I3Q53FA7 332 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 LIPIQ6XZB0 460 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 VRK2Q86Y07 508 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 ARMC10Q8N2F6 343 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 MOSPD2Q8NHP6 518 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 EFHD2Q96C19 240 aaPredicted RBP13□□□□□ -0.33
NFKB1-201ENST00000226574 P2RY12Q9H244 342 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 ZSCAN32Q9NX65 697 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 GATBO75879 557 aaKnown RBP13□□□□□ -0.33
NFKB1-201ENST00000226574 ETHE1O95571 254 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 SYN1P17600 705 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 CERS1P27544 350 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 CEBPGP53567 150 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 ERVK-21P61565 698 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 ZNF234Q14588 700 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 CBARPQ8N350 705 aaPredicted RBP13□□□□□ -0.33
NFKB1-201ENST00000226574 GDPD1Q8N9F7 314 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 OR52E2Q8NGJ4 325 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 OR5M3Q8NGP4 307 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 PPP1R14AQ96A00 147 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 CASD1Q96PB1 797 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 RASD1Q9Y272 281 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
NFKB1-201ENST00000226574 POM121CA8CG34 1229 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 AK4P27144 223 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-201ENST00000226574 TAS2R38P59533 333 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 PFN3P60673 137 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 PITPNAQ00169 270 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 GPR19Q15760 415 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 ALG1LQ6GMV1 187 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 XKRXQ6PP77 449 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 TMEFF1Q8IYR6 380 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 PJA1Q8NG27 643 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 OVCA2Q8WZ82 227 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 ARL6Q9H0F7 186 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 NDRG4Q9ULP0 352 aaKnown RBP12.99□□□□□ -0.33
NFKB1-201ENST00000226574 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 ZNF879B4DU55 563 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 C11orf98E9PRG8 122 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 GIFP27352 417 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 PSMB10P40306 273 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 CLDN2P57739 230 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 MSRB3Q8IXL7 192 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 PHOSPHO1Q8TCT1 267 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 GALNT9Q9HCQ5 603 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 POT1Q9NUX5 634 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 TEX10Q9NXF1 929 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-201ENST00000226574 MGAT4CQ9UBM8 478 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 TMEFF2Q9UIK5 374 aaPredicted RBP12.99□□□□□ -0.33
NFKB1-201ENST00000226574 EIF1AYO14602 144 aaKnown RBP12.99□□□□□ -0.33
NFKB1-201ENST00000226574 GPX5O75715 221 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 DNASE1L1P49184 302 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 FAAH2Q6GMR7 532 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 ERN2Q76MJ5 926 aaKnown RBP12.99□□□□□ -0.33
NFKB1-201ENST00000226574 C10orf111Q8N326 155 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 CHCHD4Q8N4Q1 142 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 OR4K14Q8NGD5 310 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 OR8J2Q8NGG1 315 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
NFKB1-201ENST00000226574 MEIS3P1A6NDR6 274 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 C5orf51A6NDU8 294 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 LRRN3E7EW58 273 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 PAHP00439 452 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 EVI2BP34910 448 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 VSX2P58304 361 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 WDR5P61964 334 aaKnown RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 TAP2Q03519 686 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 PUDPQ08623 228 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 DHCR24Q15392 516 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 TMEM44Q2T9K0 475 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 EIPR1Q53HC9 387 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 TMPRSS12Q86WS5 348 aa12.98□□□□□ -0.33
NFKB1-201ENST00000226574 TRMT10AQ8TBZ6 339 aaKnown RBP12.98□□□□□ -0.33
NFKB1-201ENST00000226574 ABCG4Q9H172 646 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms