RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SGCAQ16586 387 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 PRSS53Q2L4Q9 553 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 ADPRMQ3LIE5 342 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 HIPK1Q86Z02 1210 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 PSMA8Q8TAA3 256 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.4□□□□□ -1.079e-9■■■□□ 16
MTHFD1-201ENST00000216605 LRRC20Q8TCA0 184 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 UTP15Q8TED0 518 aaKnown RBP8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 POP5Q969H6 163 aaKnown RBP8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 MARVELD3Q96A59 401 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 TXNDC15Q96J42 360 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 SLC6A18Q96N87 628 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 AMBRA1Q9C0C7 1298 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 NT5DC2Q9H857 520 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 ACTR10Q9NZ32 417 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 MRPS7Q9Y2R9 242 aaKnown RBP8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 HS3ST3A1Q9Y663 406 aa8.4□□□□□ -1.07
MTHFD1-201ENST00000216605 ZNF860A6NHJ4 632 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 SLC28A2O43868 658 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 TBX6O95947 436 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 IGHV4-34P06331 123 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 CELA2BP08218 269 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 PEBP1P30086 187 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 DCTP40126 519 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 RAD52P43351 418 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 VLDLRP98155 873 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 IL5RAQ01344 420 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 TARDBPQ13148 414 aaKnown RBP eCLIP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 PDE7AQ13946 482 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 VEZF1Q14119 521 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 CTU2Q2VPK5 515 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 DEFB134Q4QY38 66 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 FIGLAQ6QHK4 219 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 DENND4AQ7Z401 1863 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 C6orf120Q7Z4R8 191 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ASPGQ86U10 573 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 SYNPOQ8N3V7 929 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 SVOPQ8N4V2 548 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 SETD9Q8NE22 299 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 OR2L5Q8NG80 312 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 NDNFQ8TB73 568 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 FAR1Q8WVX9 515 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 FAM131CQ96AQ9 280 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 MS4A6EQ96DS6 147 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 MBOAT4Q96T53 435 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 C12orf71A8MTZ7 269 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 PGRMC2O15173 223 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 PRAMEF10O60809 474 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ANGPTL1O95841 491 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 C9P02748 559 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 HOXC4P09017 264 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ZNF888P0CJ79 500 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 NR2F1P10589 423 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 FOSL2P15408 326 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 IGFBP5P24593 272 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 PIGAP37287 484 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 BLKP51451 505 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 FADDQ13158 208 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 CDK5R2Q13319 367 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 KRR1Q13601 381 aaKnown RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ZNF750Q32MQ0 723 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ZNF691Q5VV52 312 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 C18orf63Q68DL7 685 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ZNF793Q6ZN11 406 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 CBLL1Q75N03 491 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 Q7L0L9 218 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 SYT13Q7L8C5 426 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 MAMDC2Q7Z304 686 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 UBE3DQ7Z6J8 389 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 TAGAPQ8N103 731 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 DYNC2LI1Q8TCX1 351 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 CREB3L4Q8TEY5 395 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 SEC22CQ9BRL7 303 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 IL1RAPQ9NPH3 570 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 POLE4Q9NR33 117 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ABCB10Q9NRK6 738 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 WSB2Q9NYS7 404 aaPredicted RBP8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ATG4BQ9Y4P1 393 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 UGT2A1Q9Y4X1 527 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 AP1M2Q9Y6Q5 423 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ZNF780BQ9Y6R6 833 aa8.39□□□□□ -1.07
MTHFD1-201ENST00000216605 ERVH48-1M5A8F1 160 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 SLC16A6O15403 523 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 DLGAP3O95886 979 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 UGT2B7P16662 529 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 HOXB9P17482 250 aaPredicted RBP8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 HOXB6P17509 224 aaKnown RBP8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 CPN2P22792 545 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 ATP5A1P25705 553 aaKnown RBP8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 PSMB9P28065 219 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 PCGF2P35227 344 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 AHRP35869 848 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 RPS15AP62244 130 aaKnown RBP8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 SPIBQ01892 262 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 HHEXQ03014 270 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 KIR2DS3Q14952 304 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 ZNF630Q2M218 657 aaPredicted RBP8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 RPS26P11Q5JNZ5 115 aaPredicted RBP8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 OR7E24Q6IFN5 339 aa8.38□□□□□ -1.07
MTHFD1-201ENST00000216605 ABHD17CQ6PCB6 329 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms