RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 SLC43A1O75387 559 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 SIX6O95475 246 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 LALBAP00709 142 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 PDYNP01213 254 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 IL1AP01583 271 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 RD3LP0DJH9 198 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 TNFRSF1BP20333 461 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 UQCRC2P22695 453 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 GCAP28676 217 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 IDUAP35475 653 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 GCGRP47871 477 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 KIAA1024LP59773 190 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 PTPRRQ15256 657 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 EOGTQ5NDL2 527 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 KIAA1211LQ6NV74 962 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 NKX6-2Q9C056 277 aaPredicted RBP9.94□□□□□ -0.82
VCL-201ENST00000211998 ATP13A2Q9NQ11 1180 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 THSD1Q9NS62 852 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 BLOC1S5-TXNDC5H3BN57 136 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 ACRP10323 421 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 GNRHRP30968 328 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 P2RX3P56373 397 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 FAM189BP81408 668 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 LRIT3Q3SXY7 679 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 NHSL2Q5HYW2 709 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 HACD4Q5VWC8 232 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 ENPP7Q6UWV6 458 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 NRROSQ86YC3 692 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 ARHGAP12Q8IWW6 846 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 OR5D16Q8NGK9 328 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 LMO3Q8TAP4 145 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 C16orf58Q96GQ5 468 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 PKMYT1Q99640 499 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 SDR39U1Q9NRG7 319 aaPredicted RBP9.94□□□□□ -0.82
VCL-201ENST00000211998 SLC6A5Q9Y345 797 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 AFDNP55196 1824 aaKnown RBP9.94□□□□□ -0.82
VCL-201ENST00000211998 UNC119BA6NIH7 251 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 FZD9O00144 591 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 TAP2Q03519 686 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 IGSF11Q5DX21 431 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 ZNF776Q68DI1 518 aaPredicted RBP9.94□□□□□ -0.82
VCL-201ENST00000211998 HFE2Q6ZVN8 426 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 SPRED1Q7Z699 444 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 RETREG3Q86VR2 466 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 OR6N2Q8NGY6 317 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 OVCA2Q8WZ82 227 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 SMPDL3AQ92484 453 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 JSRP1Q96MG2 331 aaPredicted RBP9.94□□□□□ -0.82
VCL-201ENST00000211998 FAM83CQ9BQN1 747 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 DUOX1Q9NRD9 1551 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 ABCC6O95255 1503 aa9.94□□□□□ -0.82
VCL-201ENST00000211998 UPK3BL1B0FP48 263 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 C9J4A7 227 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 UPK3BL2E5RIL1 263 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 GABARAPO95166 117 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ALPLP05186 524 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ACP5P13686 325 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ATP1B2P14415 290 aaPredicted RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 GPX3P22352 226 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 FXNQ16595 210 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 CCL14Q16627 93 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ADPRMQ3LIE5 342 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 GTDC1Q4AE62 458 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 CES4AQ5XG92 561 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 C18orf63Q68DL7 685 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 SMYD5Q6GMV2 418 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 C17orf107Q6ZR85 190 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 TMEM135Q86UB9 458 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 POC1BQ8TC44 478 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ZNF768Q9H5H4 540 aaKnown RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 EMC7Q9NPA0 242 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 TMEM248Q9NWD8 314 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 DLGAP4Q9Y2H0 992 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 NAALAD2Q9Y3Q0 740 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 SHPRHQ149N8 1683 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 RICTORQ6R327 1708 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 SLC22A31A6NKX4 558 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 AOC2O75106 756 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 AMY2BP19961 511 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ZNF763Q0D2J5 394 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 MAPK14Q16539 360 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 CLPPQ16740 277 aaPredicted RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 NKPD1Q17RQ9 610 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 GDF6Q6KF10 455 aaPredicted RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 NLRP8Q86W28 1048 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 CLDN19Q8N6F1 224 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ZFAND1Q8TCF1 268 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 THAP4Q8WY91 577 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 DHRS4Q9BTZ2 278 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ZNF701Q9NV72 531 aaPredicted RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 E2F3O00716 465 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 C1QBP02746 253 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 TRAPPC2P0DI81 140 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 TRAPPC2BP0DI82 140 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 NR2C1P13056 603 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 GDI1P31150 447 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 PPT1P50897 306 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ACTA2P62736 377 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ACTG2P63267 376 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 MBTPS1Q14703 1052 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms