RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 PRODHO43272 600 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 SEC14L5O43304 696 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 FRS3O43559 492 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 C1QBP02746 253 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 CTSLP07711 333 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 ARSBP15848 533 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 PTNP21246 168 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 GABRA5P31644 462 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 SLC6A11P48066 632 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 CSTF1Q05048 431 aaKnown RBP9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 COX10Q12887 443 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 TOR2AQ5JU69 321 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 LIPIQ6XZB0 460 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 SLC36A4Q6YBV0 504 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 ASB18Q6ZVZ8 466 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 KIF18BQ86Y91 864 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 TMEM163Q8TC26 289 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 PHF21AQ96BD5 680 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 ZNF689Q96CS4 500 aaPredicted RBP9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 WDR34Q96EX3 536 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 SLC35G5Q96KT7 338 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 ART5Q96L15 291 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 NEUROD4Q9HD90 331 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 SIRT3Q9NTG7 399 aaPredicted RBP9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 CPNE7Q9UBL6 633 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 P2RX2Q9UBL9 471 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 TAC3Q9UHF0 121 aa9.91□□□□□ -0.82
CX3CL1-201ENST00000006053 A0A1B0GVC2 190 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 PRR23AA6NEV1 266 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 A6NIN4 97 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 KPNA3O00505 521 aaPredicted RBP9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 SHOXO15266 292 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 PI15O43692 258 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ORC5O43913 435 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 STATHP02808 62 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 LIMS3P0CW19 117 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 LIMS4P0CW20 117 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ACADMP11310 421 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 SLC7A9P82251 487 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 RAB40BQ12829 278 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 MAB21L1Q13394 359 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 DDX53Q86TM3 631 aaKnown RBP9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 TBC1D19Q8N5T2 526 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ANKRD53Q8N9V6 530 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ATF6BQ99941 703 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 MED18Q9BUE0 208 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ZCCHC3Q9NUD5 404 aaKnown RBP9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 TEX10Q9NXF1 929 aaPredicted RBP9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 GON4LQ3T8J9 2241 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 A0A1W2PRQ8 180 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 SHISA3A0PJX4 238 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 GLOD5A6NK44 160 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 EFEMP2O95967 443 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 LRG1P02750 347 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 PPP2R1BP30154 601 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 MAPK9P45984 424 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 GAS1P54826 345 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 CDH11P55287 796 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 RRAS2P62070 204 aaPredicted RBP9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 CDK5Q00535 292 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ESCO2Q56NI9 601 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 TMEM215Q68D42 235 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 RAET1GQ6H3X3 334 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 SLC27A4Q6P1M0 643 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 IL17RCQ8NAC3 791 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 OR5AR1Q8NGP9 310 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 SLC22A8Q8TCC7 542 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ST8SIA2Q92186 375 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 SENP5Q96HI0 755 aaPredicted RBP9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 TMEM43Q9BTV4 400 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ERVMER34-1Q9H9K5 563 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 FANCFQ9NPI8 374 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 MAN2C1Q9NTJ4 1040 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 CUEDC1Q9NWM3 386 aaPredicted RBP9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 IL20RAQ9UHF4 553 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 ACAD8Q9UKU7 415 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 PCDHGB7Q9Y5F8 929 aa9.9□□□□□ -0.82
CX3CL1-201ENST00000006053 TMEM129A0AVI4 362 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 I3L521 148 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 PROM1O43490 865 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 POP7O75817 140 aaKnown RBP9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 TYRP14679 529 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 NNMTP40261 264 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 EVX1P49640 407 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 CLDN20P56880 219 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 ABATP80404 500 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 KHDRBS2Q5VWX1 349 aaKnown RBP9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 RRM2BQ7LG56 351 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 TIGD4Q8IY51 512 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 VN1R2Q8NFZ6 395 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 OR4M1Q8NGD0 313 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 OR8H1Q8NGG4 311 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 OR8D4Q8NGM9 314 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 SLC38A2Q96QD8 506 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 USB1Q9BQ65 265 aaKnown RBP9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 ARHGAP9Q9BRR9 750 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 FUZQ9BT04 418 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 KCNN2Q9H2S1 579 aa9.9□□□□□ -0.83
CX3CL1-201ENST00000006053 NIPAL2Q9H841 368 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms