RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr1193A2AV13 318 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr190K7N5T5 307 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sult2b1O35400 338 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ccrl2O35457 360 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Irf2P23906 349 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mbl2P41317 244 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gdf5P43027 495 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 XkrxQ5GH68 449 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr859Q7TRF5 309 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1093Q8VF14 322 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sfxn1Q99JR1 322 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 4930578G10RikQ9D4Q4 153 aa11.42□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn2r107E9PZJ7 861 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr550E9Q544 316 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 PigfO09101 219 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Abcb1aP21447 1276 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Pax7P47239 503 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Lim2P56563 173 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nadsyn1Q711T7 725 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Plekhn1Q8C886 359 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Pex6Q99LC9 981 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 3300002I08RikQ9CXH3 147 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tmem35aQ9D328 167 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Apex1P28352 317 aaKnown RBP11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 HnrnpkP61979 463 aaKnown RBP11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kcnab2P62482 367 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fam71bQ5STT6 665 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Lrit2Q6PFC5 549 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1463Q7TQR3 310 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rnf170Q8CBG9 286 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Dio3Q91ZI8 304 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Twsg1Q9EP52 222 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Elp4Q9ER73 422 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn2r61L7N2B8 865 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Arg2O08691 354 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kcnj9P48543 393 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hcrtr1P58307 416 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm527Q4KL13 310 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Q8BN57 294 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ubr7Q8BU04 425 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Snapc5Q8R2K7 98 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm8334F7CD45 553 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gpld1O70362 837 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tpgs2Q66JT5 296 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 SnupnQ80W37 358 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sphk1Q8CI15 382 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mill2Q8HWE5 355 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr53Q8VGL8 312 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Psmd8Q9CX56 353 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Spaca7Q9D2S4 182 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tmem81Q9D5K1 259 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Il17rbQ9JIP3 499 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cpne6Q9Z140 557 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Atxn1lP0C7T6 687 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rab4aP56371 218 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Bend4P86174 541 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hif3aQ0VBL6 662 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ppp1r26Q6A025 1163 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 IlvblQ8BU33 632 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ston2Q8BZ60 895 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tas1r3Q925D8 858 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 SvbpQ99LQ4 66 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cnot9Q9JKY0 299 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cdh17Q9R100 827 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm3727J3QM54 205 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hbb-yP02104 147 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 ItgamP05555 1153 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 C1qbP14106 253 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 RhoP15409 348 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 HexbP20060 536 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tia1P52912 386 aaKnown RBP11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Aqp2P56402 271 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Idh3gP70404 393 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Parp8Q3UD82 852 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Klhdc9Q3USL1 350 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc23a3Q60850 611 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 PterQ60866 349 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slitrk5Q810B7 957 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Stk17bQ8BG48 372 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ncs1Q8BNY6 190 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ripply3Q924S9 152 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Chrm3Q9ERZ3 589 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 PnckQ9QYK9 343 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm5788A0A1Y7VK80 144 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Man2b1O09159 1013 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 EnsaP60840 121 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tmprss11bQ14C59 416 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zpbp2Q6X786 326 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mpped1Q91ZG2 326 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Snu13Q9D0T1 128 aaKnown RBP11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 CasrQ9QY96 1079 aa11.41□□□□□ -0.58
Trim56-201ENSMUST00000054384 Map1bP14873 2464 aaKnown RBP11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Amy2a1E9PV85 245 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Amy2P00688 508 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 RpiaP47968 303 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Epha5Q60629 876 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 MaobQ8BW75 520 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 CenpiQ8K1K4 746 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Peak1Q69Z38 1735 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 4930402K13RikB1AW18 415 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms