RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 ChadO55226 358 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cpne2P59108 548 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 DhpsQ3TXU5 369 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cdk15Q3V3A1 433 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Foxd3Q61060 465 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 2810021J22RikQ8BIB6 539 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Znf322Q8BZ89 410 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Q9CWU4 180 aaKnown RBP15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fkbp1bQ9Z2I2 108 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1188A2AV10 312 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ubxn2bQ0KL01 331 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Epha1Q60750 977 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Adh7Q64437 374 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr714Q7TRN0 317 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rpl7a-ps3A0A140T8L1 270 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 BC035947B2RQY6 695 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 2310061I04RikB8JJ69 315 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Opn1mwO35599 359 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Wnt7aP24383 349 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vmn1r21Q8R2C6 297 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Sema6cQ9WTM3 931 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Qrich2A0A140LIY9 2337 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vmn2r91E9Q2U5 856 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 CenptQ3TJM4 515 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1474Q7TQQ8 314 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cbx7Q8VDS3 158 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cts6Q9ET52 334 aa15.86■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cyp1a2P00186 513 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cd82P40237 266 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Prtn3Q61096 254 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Adgre1Q61549 931 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Lrit2Q6PFC5 549 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cpped1Q8BFS6 312 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gpr22Q8BZL4 432 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc16a14Q8K1C7 512 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1309Q8VF83 320 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vsx1Q91V10 363 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tssk6Q925K9 273 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 PrepQ9QUR6 710 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc7a11Q9WTR6 502 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Kif26bQ7TNC6 2112 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc37a4A0A1L1SUI3 450 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fam71f2B2RXB0 297 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr424E9Q0Q2 315 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Gm3685J3QPP2 205 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 LplP11152 474 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Secisbp2Q3U1C4 858 aaKnown RBP15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Pum2Q80U58 1066 aaKnown RBP15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Katnal1Q8K0T4 488 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ppp1r14aQ91VC7 147 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 A0A286YCD0 109 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 CcnhQ61458 323 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 RgmaQ6PCX7 454 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Lrrc66Q8K0B3 872 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fmo4Q8VHG0 560 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Eral1Q9CZU4 437 aaKnown RBP15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cml5Q9QXS8 227 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Scgb2b3D2XZ38 112 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ccdc190Q3URK1 288 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tha1Q6XPS7 400 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Nob1Q8BW10 403 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vmn1r205Q8R276 316 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ptf1aQ9QX98 324 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vmn2r103E9PWW0 856 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 CryzP47199 331 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Arrb1Q8BWG8 418 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Sall4Q8BX22 1067 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Lacc1Q8BZT9 430 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ncr1Q8C567 325 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Zbtb9Q8CDC7 459 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Mgat4cQ9D306 478 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Slc6a19Q9D687 634 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Rras2P62071 204 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Ces2bQ6PDB7 556 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Carns1Q6ZPS2 827 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr1198Q7TR12 308 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Adam30Q811Q3 732 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Q8R3C1 574 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Prss39O70169 367 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Kcnn3P58391 732 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Lingo4Q149C3 593 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Tmem104Q3TB48 496 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Kng2Q6S9I3 644 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Prl3a1Q78Y73 227 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr776Q7TRI3 312 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Olfr31E9Q3K2 317 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Arhgap40E9Q6X9 672 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Il10P18893 178 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Bbox1Q924Y0 387 aa15.85■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Hcrtr2P58308 460 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Vamp3P63024 103 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Cry1P97784 606 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 ErfeQ6PGN1 340 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Glo1Q9CPU0 184 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Wdr45bQ9CR39 344 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fthl17bA2AHC5 176 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fthl17cA2AHC6 176 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Nat1P50294 290 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fthl17dQ3SXD1 176 aa15.84■□□□□ 0.13
Ccdc88a-201ENSMUST00000040182 Fthl17fQ3SXD2 176 aa15.84■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms