RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 LIPGQ9Y5X9 500 aa13.8□□□□□ -0.2
PHGDH-231ENST00000641939 A0A087WV62 115 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 LRRC3CA6NJW4 275 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 E9PLN8 166 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 SUSD5O60279 629 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 TRIM3O75382 744 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ERN1O75460 977 aaKnown RBP13.79□□□□□ -0.2
PHGDH-231ENST00000641939 SNX4O95219 450 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ZWINTO95229 277 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 CELA3AP09093 270 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 RFPL3SP0C7P2 107 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 MC3RP41968 323 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 CASP3P42574 277 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ASMTP46597 345 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ADORA2A-AS1P86434 159 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 CHI3L2Q15782 390 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 XKR7Q5GH72 579 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 BICRALQ6AI39 1079 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 C3P1Q6ZMU1 363 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 TRILQ7L0X0 811 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 NUP54Q7Z3B4 507 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 SLC34A3Q8N130 599 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ZNF808Q8N4W9 903 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ZNF764Q96H86 408 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ZNF597Q96LX8 424 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 PPP3R2Q96LZ3 170 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 VSTM2LQ96N03 204 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 AMDHD1Q96NU7 426 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 TSSK3Q96PN8 268 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 VKORC1Q9BQB6 163 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ANGPTL4Q9BY76 406 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 LDAHQ9H6V9 325 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ZNF703Q9H7S9 590 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-231ENST00000641939 FOLH1BQ9HBA9 442 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 KCNK9Q9NPC2 374 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 QPCTLQ9NXS2 382 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 B4GALT7Q9UBV7 327 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 BAIAP2L1Q9UHR4 511 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 ITPR2Q14571 2701 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 PKDREJQ9NTG1 2253 aa13.79□□□□□ -0.2
PHGDH-231ENST00000641939 A0A1B0GVC2 190 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 OR14I1A6ND48 311 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 TMEM114B3SHH9 223 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 NPIPA2E9PIF3 369 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 NPIPA3F8WFD2 350 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 PLOD2O00469 737 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 PDPK1O15530 556 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 AKAP10O43572 662 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 HCN1O60741 890 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 TBX19O60806 448 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 COQ9O75208 318 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 NME6O75414 186 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-231ENST00000641939 SKAP2O75563 359 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-231ENST00000641939 HSPA4LO95757 839 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 SERPINE1P05121 402 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 DHRS4L1P0CG22 281 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 CT45A8P0DMV1 189 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 CT45A9P0DMV2 189 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 BCKDHAP12694 445 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 COL8A1P27658 744 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 MAPK1P28482 360 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 SMSP52788 366 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 CORO7P57737 925 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 PSPHP78330 225 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 ATP6AP1LQ52LC2 224 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 CT45A2Q5DJT8 189 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 CES4AQ5XG92 561 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 TMEM81Q6P7N7 255 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 TMEM107Q6UX40 140 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 PHF10Q8WUB8 498 aaKnown RBP13.78□□□□□ -0.2
PHGDH-231ENST00000641939 HGDQ93099 445 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 REEP4Q9H6H4 257 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 METTL7AQ9H8H3 244 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 C19orf53Q9UNZ5 99 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-231ENST00000641939 CELSR2Q9HCU4 2923 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 ARHGAP21Q5T5U3 1957 aa13.78□□□□□ -0.2
PHGDH-231ENST00000641939 TRGV5A0A0B4J1U4 118 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 OR6C70A6NIJ9 312 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 AQP7O14520 342 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 ADAM10O14672 748 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 BCKDKO14874 412 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 ITM2AO43736 263 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 PEX11AO75192 247 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 UGT2B11O75310 529 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 LYPLA1O75608 230 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-231ENST00000641939 IFI6P09912 130 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 AGAP20933 346 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 GDF1P27539 372 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 MASP1P48740 699 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 MAN2A2P49641 1150 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 ABCE1P61221 599 aaKnown RBP13.77□□□□□ -0.21
PHGDH-231ENST00000641939 ZNF155Q12901 538 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-231ENST00000641939 SNTA1Q13424 505 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 ART3Q13508 389 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 PDE7AQ13946 482 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 MPP2Q14168 576 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 EMC4Q5J8M3 183 aa13.77□□□□□ -0.21
PHGDH-231ENST00000641939 BEND6Q5SZJ8 279 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms