RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 ENGP17813 658 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 SERPINF1P36955 418 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 CEBPGP53567 150 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 PRKCDQ05655 676 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 SYT16Q17RD7 645 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 YOD1Q5VVQ6 348 aaPredicted RBP5.39□□□□□ -1.55
RTTN-218ENST00000640408 ZNF782Q6ZMW2 699 aaPredicted RBP5.39□□□□□ -1.55
RTTN-218ENST00000640408 TMEM145Q8NBT3 493 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 OR4Q3Q8NH05 313 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 TMBIM1Q969X1 311 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 TSACCQ96A04 125 aaPredicted RBP5.39□□□□□ -1.55
RTTN-218ENST00000640408 FAIM2Q9BWQ8 316 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 LHPPQ9H008 270 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 TIGARQ9NQ88 270 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 CPNE7Q9UBL6 633 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 HSPE1-MOB4S4R3N1 261 aa5.39□□□□□ -1.55
RTTN-218ENST00000640408 ATG2BQ96BY7 2078 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 POM121BA6NF01 834 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 NCF1BA6NI72 391 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 EFCAB7A8K855 629 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 NCF1CA8MVU1 366 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 CAPN5O15484 640 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 SLC28A2O43868 658 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 SCGNO76038 276 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 AHSGP02765 367 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 H2AFB2P0C5Z0 115 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 NCF1P14598 390 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 ELK4P28324 431 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 NOVA1P51513 510 aaKnown RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 ARSDP51689 593 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 MC1RQ01726 317 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 MEF2AQ02078 507 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 BAMBIQ13145 260 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 NAE1Q13564 534 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 DSG2Q14126 1118 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 TMEM44Q2T9K0 475 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 ALG11Q2TAA5 492 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 RHOUQ7L0Q8 258 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 LINGO2Q7L985 606 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 MILR1Q7Z6M3 343 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 ST8SIA2Q92186 375 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 FCRL4Q96PJ5 515 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 ZNF471Q9BX82 626 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 DNTTIP1Q9H147 329 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 PILRBQ9UKJ0 227 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 RARRES3Q9UL19 164 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 GTF2A1LQ9UNN4 478 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 A8MU76 341 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 NUDT21O43809 227 aaKnown RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 PRAMEF2O60811 474 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 NIPSNAP2O75323 286 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 BCAS1O75363 584 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 ATE1O95260 518 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 GPC1P35052 558 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 VEGFCP49767 419 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 GRIK2Q13002 908 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 GAS6Q14393 721 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 OXA1LQ15070 435 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 GPR68Q15743 365 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 MEP1AQ16819 746 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 IQCCQ4KMZ1 466 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 RABL3Q5HYI8 236 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 PRAMEF14Q5SWL7 426 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 PRAMEF13Q5VWM6 474 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 PSAPL1Q6NUJ1 521 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 PAMR1Q6UXH9 720 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 C3P1Q6ZMU1 363 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 RTL4Q6ZR62 310 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 FTMTQ8N4E7 242 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 Q8N9G6 341 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 DNAJB8Q8NHS0 232 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 ADAMTS18Q8TE60 1221 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 ZFP90Q8TF47 636 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 CANT1Q8WVQ1 401 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 FUBP1Q96AE4 644 aaKnown RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 SLC45A3Q96JT2 553 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 ZPBPQ9BS86 351 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 OPA3Q9H6K4 179 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 RDH14Q9HBH5 336 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 C1orf109Q9NX04 203 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 NDRG3Q9UGV2 375 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 RP1L1Q8IWN7 2480 aaPredicted RBP5.38□□□□□ -1.55
RTTN-218ENST00000640408 CACNA1EQ15878 2313 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 MCIDASD6RGH6 385 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 H3BUI4 141 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 TNFRSF11BO00300 401 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 ADAMDEC1O15204 470 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 KERAO60938 352 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 SULT1C4O75897 302 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 BCKDHBP21953 392 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 CCR8P51685 355 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 TAS2R38P59533 333 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 TARDBPQ13148 414 aaKnown RBP eCLIP5.38□□□□□ -1.55
RTTN-218ENST00000640408 PUM1Q14671 1186 aaKnown RBP eCLIP5.38□□□□□ -1.55
RTTN-218ENST00000640408 BAK1Q16611 211 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 C6orf141Q5SZD1 244 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 METRNLQ641Q3 311 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 PAQR3Q6TCH7 311 aa5.38□□□□□ -1.55
RTTN-218ENST00000640408 WDR53Q7Z5U6 358 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms