RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	CDH13	P55290	713 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	EFR3A	Q14156	821 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	RASA2	Q15283	850 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	DCST1	Q5T197	706 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	FNDC7	Q5VTL7	733 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	TMEM81	Q6P7N7	255 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	GBP7	Q8N8V2	638 aa	Predicted RBP	13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	C9orf106	Q8NAJ2	232 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	OR4K17	Q8NGC6	315 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	HGD	Q93099	445 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	TMBIM1	Q969X1	311 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	COL21A1	Q96P44	957 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	HBEGF	Q99075	208 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	LRRC1	Q9BTT6	524 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	PIGM	Q9H3S5	423 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	ZBTB26	Q9HCK0	441 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	NEUROD4	Q9HD90	331 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	FARSB	Q9NSD9	589 aa	Known RBP	13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	ZDHHC18	Q9NUE0	388 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	FETUB	Q9UGM5	382 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	NDRG3	Q9UGV2	375 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	EXO1	Q9UQ84	846 aa	Known RBP	13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	STK38L	Q9Y2H1	464 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	OR10H1	Q9Y4A9	318 aa		13.38	□□□□□ -0.27
TARDBP-231	ENST00000639599	POLQ	O75417	2590 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599		A0A087WUV0	522 aa	Predicted RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	PCDH7	O60245	1069 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	UGT2B11	O75310	529 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	URI1	O94763	535 aa	Predicted RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	SUPT7L	O94864	414 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	HSD3B1	P14060	373 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	DRD5	P21918	477 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	TCEA1	P23193	301 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	CHM	P24386	653 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	HSD3B2	P26439	372 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	MRPS35	P82673	323 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	FOXD4	Q12950	439 aa	Predicted RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	GAB1	Q13480	694 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	HEPACAM	Q14CZ8	416 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	POU4F3	Q15319	338 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	LTB4R	Q15722	352 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	DEFB113	Q30KQ7	82 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	TRMT12	Q53H54	448 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	LETMD1	Q6P1Q0	360 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	RPS27L	Q71UM5	84 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	PLCZ1	Q86YW0	608 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	TRIM42	Q8IWZ5	723 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	CDYL2	Q8N8U2	506 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	CDC26	Q8NHZ8	85 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	ZNF483	Q8TF39	744 aa	Predicted RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	EXOSC8	Q96B26	276 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	INTS12	Q96CB8	462 aa	Known RBP	13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	TM4SF18	Q96CE8	201 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	TUBA1C	Q9BQE3	449 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	OR2B2	Q9GZK3	357 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	MCM8	Q9UJA3	840 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	WIF1	Q9Y5W5	379 aa		13.37	□□□□□ -0.27
TARDBP-231	ENST00000639599	HCFC1	P51610	2035 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	EXOC1L	A0A1B0GW35	172 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	OR6C70	A6NIJ9	312 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599		A8MT66	165 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	COQ9	O75208	318 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	ULK1	O75385	1050 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.36	□□□□□ -0.27	2e-8	■■■■■ 29.2
TARDBP-231	ENST00000639599	OR4F21	O95013	312 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	CBX7	O95931	251 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	SNRPA	P09012	282 aa	Known RBP	13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	CPN1	P15169	458 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	S1PR1	P21453	382 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	SRD5A2	P31213	254 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	MAGEA12	P43365	314 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	CLC	Q05315	142 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	ACSM2A	Q08AH3	577 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	GALNT1	Q10472	559 aa	Predicted RBP	13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	ZNF155	Q12901	538 aa	Predicted RBP	13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	CSTF3	Q12996	717 aa	Known RBP	13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	KRTAP21-3	Q3LHN1	58 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	SPIN4	Q56A73	249 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	ACSM2B	Q68CK6	577 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	FAM180B	Q6P0A1	224 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	CCDC116	Q8IYX3	515 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	FAM9C	Q8IZT9	166 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	GCNT2	Q8N0V5	402 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	MMP21	Q8N119	569 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	UHMK1	Q8TAS1	419 aa	Known RBP	13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	WNT2B	Q93097	391 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	ISL2	Q96A47	359 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	ERP27	Q96DN0	273 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	MBD6	Q96DN6	1003 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	MTBP	Q96DY7	904 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	DACH2	Q96NX9	599 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	BBS4	Q96RK4	519 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	ADO	Q96SZ5	270 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	GALNT8	Q9NY28	637 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	TAS2R9	Q9NYW1	312 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	ZNF180	Q9UJW8	692 aa		13.36	□□□□□ -0.27
TARDBP-231	ENST00000639599	PACSIN3	Q9UKS6	424 aa		13.36	□□□□□ -0.27

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