RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR4N2Q8NGD1 307 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 NEIL3Q8TAT5 605 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.21■□□□□ 0.19
PNKP-230ENST00000638016 GFM2Q969S9 779 aaKnown RBP16.21■□□□□ 0.19
PNKP-230ENST00000638016 TTYH2Q9BSA4 534 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 METTL7AQ9H8H3 244 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 FOLH1BQ9HBA9 442 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 MYNNQ9NPC7 610 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 NPDC1Q9NQX5 325 aaPredicted RBP16.21■□□□□ 0.19
PNKP-230ENST00000638016 CFL2Q9Y281 166 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 C15orf41Q9Y2V0 281 aa16.21■□□□□ 0.19
PNKP-230ENST00000638016 C15orf38-AP3S2A0A0A6YYH1 394 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 FRG2CA6NGY1 282 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 FIGNL2A6NMB9 653 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 RSL1D1O76021 490 aaKnown RBP16.2■□□□□ 0.18
PNKP-230ENST00000638016 CT45A8P0DMV1 189 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 CT45A9P0DMV2 189 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 UROSP10746 265 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 ARRB2P32121 409 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 MC3RP41968 323 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 PPICP45877 212 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 NCBP2P52298 156 aaKnown RBP eCLIP16.2■□□□□ 0.182e-9■■■■□ 25.4
PNKP-230ENST00000638016 CT45A2Q5DJT8 189 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 TBCELQ5QJ74 424 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 DCST1Q5T197 706 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 C1orf185Q5T7R7 199 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 WLSQ5T9L3 541 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 TMEM211Q6ICI0 200 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 NOXRED1Q6NXP6 359 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 TMEM107Q6UX40 140 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 ANGPTL8Q6UXH0 198 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 Q6ZSR9 355 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 SEM1Q6ZVN7 128 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 LIX1LQ8IVB5 337 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 OR10Q1Q8NGQ4 319 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 AGR3Q8TD06 166 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 SARAFQ96BY9 339 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 VSTM2LQ96N03 204 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 BBS4Q96RK4 519 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 ACKR4Q9NPB9 350 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 GIMAP4Q9NUV9 329 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 MKS1Q9NXB0 559 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 B4GALT7Q9UBV7 327 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 PRODH2Q9UF12 536 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 GIMAP2Q9UG22 337 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 LGALS13Q9UHV8 139 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 MAPRE3Q9UPY8 281 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 GPR55Q9Y2T6 319 aaPredicted RBP16.2■□□□□ 0.18
PNKP-230ENST00000638016 POLQO75417 2590 aa16.2■□□□□ 0.18
PNKP-230ENST00000638016 A0A0G2JNJ9 132 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 MYO1GB0I1T2 1018 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 B4DXG7 233 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 AZIN1O14977 448 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 TRIM13O60858 407 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 ERN1O75460 977 aaKnown RBP16.19■□□□□ 0.18
PNKP-230ENST00000638016 SNX4O95219 450 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 LINC00032P0C843 101 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 DRD5P21918 477 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 PTPN6P29350 595 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 CHRNB4P30926 498 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 CDK9P50750 372 aaKnown RBP16.19■□□□□ 0.18
PNKP-230ENST00000638016 TFF3Q07654 80 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 CRYZQ08257 329 aaKnown RBP16.19■□□□□ 0.18
PNKP-230ENST00000638016 IFFO1Q0D2I5 559 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 TOMM20Q15388 145 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 ZNF385BQ569K4 471 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 WIPI1Q5MNZ9 446 aaPredicted RBP16.19■□□□□ 0.18
PNKP-230ENST00000638016 KANK2Q63ZY3 851 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 B3GNT6Q6ZMB0 384 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 LIX1Q8N485 282 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 CLHC1Q8NHS4 586 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 TCP10LQ8TDR4 215 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 HSPBAP1Q96EW2 488 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 TMEM41AQ96HV5 264 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 BTBD9Q96Q07 612 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 SECISBP2Q96T21 854 aaKnown RBP16.19■□□□□ 0.18
PNKP-230ENST00000638016 OSBPL11Q9BXB4 747 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 GLIPR2Q9H4G4 154 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 MIEF1Q9NQG6 463 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 RRAGDQ9NQL2 400 aaPredicted RBP16.19■□□□□ 0.18
PNKP-230ENST00000638016 QPCTLQ9NXS2 382 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 KLRF1Q9NZS2 232 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 SENP1Q9P0U3 644 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 Q9UFV3 132 aa16.19■□□□□ 0.18
PNKP-230ENST00000638016 PRAMEF25A6NGN4 478 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 TO15178 435 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 ACOX3O15254 700 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 ICOSLGO75144 302 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 SEC22BO75396 215 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 REM1O75628 298 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 TOXO94900 526 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 KRTAP10-9P60411 292 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 ZNF155Q12901 538 aaPredicted RBP16.18■□□□□ 0.18
PNKP-230ENST00000638016 ERCC6LQ2NKX8 1250 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 TIGD3Q6B0B8 471 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 MEX3BQ6ZN04 569 aaKnown RBP16.18■□□□□ 0.18
PNKP-230ENST00000638016 NUP54Q7Z3B4 507 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 GDF7Q7Z4P5 450 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 YRDCQ86U90 279 aaKnown RBP16.18■□□□□ 0.18
PNKP-230ENST00000638016 PACS2Q86VP3 889 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms