RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SERPINB1P30740 379 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 PTGS2P35354 604 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 PGM1P36871 562 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ADH7P40394 386 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 PTGDSP41222 190 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 RAP1GDS1P52306 607 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ARFIP1P53367 373 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 NUP107P57740 925 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 PPIAP62937 165 aaKnown RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 CLCQ05315 142 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 BTKQ06187 659 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 FUT7Q11130 342 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 LCP2Q13094 533 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ZNF267Q14586 743 aaPredicted RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 GGTA1PQ4G0N0 100 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 GXYLT1Q4G148 440 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 C6orf163Q5TEZ5 329 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 FRG2Q64ET8 278 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 XKRXQ6PP77 449 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 FAM111BQ6SJ93 734 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 TRILQ7L0X0 811 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 MYLK4Q86YV6 388 aaPredicted RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 CCDC71Q8IV32 467 aaPredicted RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 GPALPP1Q8IXQ4 340 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ST13P4Q8IZP2 240 aaPredicted RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 METTL4Q8N3J2 472 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 GOLM1Q8NBJ4 401 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 RBM15BQ8NDT2 890 aaKnown RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 FAM13CQ8NE31 585 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 SRFBP1Q8NEF9 429 aaKnown RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 RP9Q8TA86 221 aaKnown RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 PAQR8Q8TEZ7 354 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ASB15Q8WXK1 588 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 TANKQ92844 425 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 TMEM125Q96AQ2 219 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 TM4SF18Q96CE8 201 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 MAGED4Q96JG8 741 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ZNF681Q96N22 645 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 FRG2BQ96QU4 278 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 CCT7Q99832 543 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 CNPPD1Q9BV87 410 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ROGDIQ9GZN7 287 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 WWTR1Q9GZV5 400 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ZNF385DQ9H6B1 395 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 WDR55Q9H6Y2 383 aaPredicted RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 CXorf21Q9HAI6 301 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 MID1IP1Q9NPA3 183 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 TIMMDC1Q9NPL8 285 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 NDE1Q9NXR1 346 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 ZNF639Q9UID6 485 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 RNF6Q9Y252 685 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 MRPS33Q9Y291 106 aaKnown RBP7.21□□□□□ -1.26
PNKP-229ENST00000637897 PCDHGA11Q9Y5H2 935 aa7.21□□□□□ -1.26
PNKP-229ENST00000637897 PCNX3Q9H6A9 2034 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 NKX2-6A6NCS4 301 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 C17orf51A8MQB3 221 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 TMEM233B4DJY2 109 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 NPIPA2E9PIF3 369 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 NPIPA3F8WFD2 350 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 UBFD1O14562 309 aaKnown RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 AZIN1O14977 448 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 CDC40O60508 579 aaKnown RBP eCLIP7.2□□□□□ -1.26
PNKP-229ENST00000637897 TRIM3O75382 744 aaPredicted RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 SKAP2O75563 359 aaPredicted RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 CRCPO75575 148 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 TOXO94900 526 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 OR4F21O95013 312 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 SEMA3DO95025 777 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 CBX7O95931 251 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 CHEK2O96017 543 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 KLK1P06870 262 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 TPOP07202 933 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 SLC35E2P0CK97 266 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 NR2F6P10588 404 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 ABOP16442 354 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 TNNI3P19429 210 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 PIK3R1P27986 724 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 GALNSP34059 522 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 CPA2P48052 419 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 ATP4BP51164 291 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 FOXA1P55317 472 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 PKNOX1P55347 436 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 RIPPLY3P57055 190 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 RBPJQ06330 500 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 TGM3Q08188 693 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 CYLC2Q14093 348 aaPredicted RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 SQLEQ14534 574 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 MAPRE2Q15555 327 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 NTRK2Q16620 822 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 PRICKLE4Q2TBC4 344 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 SGO1Q5FBB7 561 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 PRAMEF20Q5VT98 475 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 KANK2Q63ZY3 851 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 POMZP3Q6PJE2 187 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 RTL4Q6ZR62 310 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 FAM98AQ8NCA5 519 aaKnown RBP7.2□□□□□ -1.26
PNKP-229ENST00000637897 OR5M9Q8NGP3 310 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 CHTF18Q8WVB6 975 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 SDCCAG3Q96C92 435 aa7.2□□□□□ -1.26
PNKP-229ENST00000637897 CTHRC1Q96CG8 243 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms