RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 PCDHGA3Q9Y5H0 932 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 KCNE3Q9Y6H6 103 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 CLCA3PQ9Y6N3 262 aa10.97□□□□□ -0.65
CLN6-223ENST00000637823 RIF1Q5UIP0 2472 aaKnown RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 ZFHX2Q9C0A1 2572 aaPredicted RBP10.97□□□□□ -0.65
CLN6-223ENST00000637823 SPAARA0A1B0GVQ0 90 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 PRAMEF27A3QJZ7 478 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 A8MUA0 341 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 IDSB3KWA1 339 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 C9J4A7 227 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 M0QX08 132 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 TM4SF5O14894 197 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SUV39H1O43463 412 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 ALOX12BO75342 701 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 PGM3O95394 542 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 ZNF682O95780 498 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 CCNYL3P0C7X3 344 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 RAP2AP10114 183 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 ACP2P11117 423 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 FCGR1AP12314 374 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 CEACAM1P13688 526 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SSTR4P31391 388 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 EMDP50402 254 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 PGDP52209 483 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 CRISP3P54108 245 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SELENOWP63302 87 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 DUSP8Q13202 625 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 ZNHIT3Q15649 155 aaPredicted RBP10.96□□□□□ -0.65
CLN6-223ENST00000637823 ARHGAP11BQ3KRB8 267 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 GPAT3Q53EU6 434 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 CYBRD1Q53TN4 286 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 TMEM164Q5U3C3 297 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 HEPHL1Q6MZM0 1159 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 ENPP6Q6UWR7 440 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 C6orf15Q6UXA7 325 aaPredicted RBP10.96□□□□□ -0.65
CLN6-223ENST00000637823 ZNF517Q6ZMY9 492 aaPredicted RBP10.96□□□□□ -0.65
CLN6-223ENST00000637823 RNF111Q6ZNA4 994 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 C16orf62Q7Z3J2 963 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 TMPRSS12Q86WS5 348 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 KRT73Q86Y46 540 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SLC44A2Q8IWA5 706 aaPredicted RBP10.96□□□□□ -0.65
CLN6-223ENST00000637823 PQLC1Q8N2U9 271 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 ZNF615Q8N8J6 731 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 ANKFN1Q8N957 763 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 GALNT6Q8NCL4 622 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 MORN4Q8NDC4 146 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 BBS10Q8TAM1 723 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 LZICQ8WZA0 190 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 PMEPA1Q969W9 287 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SLC47A1Q96FL8 570 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 FBXL20Q96IG2 436 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SEPHS2Q99611 448 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 LMF2Q9BU23 707 aaKnown RBP10.96□□□□□ -0.65
CLN6-223ENST00000637823 DOHHQ9BU89 302 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 CNPPD1Q9BV87 410 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SPATA5L1Q9BVQ7 753 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 OR10A5Q9H207 317 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SOX17Q9H6I2 414 aaPredicted RBP10.96□□□□□ -0.65
CLN6-223ENST00000637823 AKIRIN1Q9H9L7 192 aaPredicted RBP10.96□□□□□ -0.65
CLN6-223ENST00000637823 FOLH1BQ9HBA9 442 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 PRODH2Q9UF12 536 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 PADI1Q9ULC6 663 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 ERVK-19Q9WJR5 959 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 HEMK1Q9Y5R4 338 aaPredicted RBP10.96□□□□□ -0.65
CLN6-223ENST00000637823 MYO15AQ9UKN7 3530 aa10.96□□□□□ -0.65
CLN6-223ENST00000637823 SDK2Q58EX2 2172 aa10.96□□□□□ -0.66
CLN6-223ENST00000637823 A0A1W2PNU3 283 aaPredicted RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 HRKO00198 91 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 CNOT3O75175 753 aaKnown RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 SERPINB7O75635 380 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 STK17BO94768 372 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 NKX2-2O95096 273 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 DDAH2O95865 285 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 AK1P00568 194 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 ETS2P15036 469 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 AQP1P29972 269 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 SLC5A2P31639 672 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 GABRA3P34903 492 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 EFNA3P52797 238 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 ZNF155Q12901 538 aaPredicted RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 DUSP5Q16690 384 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 AP1ARQ63HQ0 302 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 FAM199XQ6PEV8 388 aaPredicted RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 LRRC74BQ6ZQY2 392 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 SHISA6Q6ZSJ9 500 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 WDR53Q7Z5U6 358 aaPredicted RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 ANKRD37Q7Z713 158 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 GALNT10Q86SR1 603 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 FAM86B1Q8N7N1 296 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 CHDHQ8NE62 594 aaPredicted RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 SLC2A12Q8TD20 617 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 GPR151Q8TDV0 419 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 RASSF5Q8WWW0 418 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 PMM1Q92871 262 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 CDS1Q92903 461 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 TAMM41Q96BW9 452 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 OTUB1Q96FW1 271 aaPredicted RBP10.95□□□□□ -0.66
CLN6-223ENST00000637823 SLC46A1Q96NT5 459 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
CLN6-223ENST00000637823 SPSB2Q99619 263 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms