RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 UNC50Q53HI1 259 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 CDC20BQ86Y33 519 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 WDSUB1Q8N9V3 476 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 NOA1Q8NC60 698 aaKnown RBP16.82■□□□□ 0.28
CLN6-220ENST00000637450 RMND5BQ96G75 393 aaPredicted RBP16.82■□□□□ 0.28
CLN6-220ENST00000637450 EHD3Q9NZN3 535 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 KLRF1Q9NZS2 232 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 JKAMPQ9P055 326 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 HEY2Q9UBP5 337 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 MCM8Q9UJA3 840 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 UTS2RQ9UKP6 389 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 CBLCQ9ULV8 474 aa16.82■□□□□ 0.28
CLN6-220ENST00000637450 GPR55Q9Y2T6 319 aaPredicted RBP16.82■□□□□ 0.28
CLN6-220ENST00000637450 A0A087WUV0 522 aaPredicted RBP16.81■□□□□ 0.28
CLN6-220ENST00000637450 FRG2CA6NGY1 282 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 IL18BPO95998 194 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 CD99P14209 185 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 OPRM1P35372 400 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 MRPS35P82673 323 aaKnown RBP16.81■□□□□ 0.28
CLN6-220ENST00000637450 RCAN2Q14206 197 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 RASA2Q15283 850 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 TCHHL1Q5QJ38 904 aaPredicted RBP16.81■□□□□ 0.28
CLN6-220ENST00000637450 ZNF678Q5SXM1 525 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 TEX35Q5T0J7 233 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 TIFABQ6ZNK6 161 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 KIF18BQ86Y91 864 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 CCDC116Q8IYX3 515 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 CDYL2Q8N8U2 506 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 C9orf106Q8NAJ2 232 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 GOT1L1Q8NHS2 421 aaPredicted RBP16.81■□□□□ 0.28
CLN6-220ENST00000637450 ZNF675Q8TD23 568 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 OR2B2Q9GZK3 357 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 SERHLQ9NQF3 203 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 EDARQ9UNE0 448 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 MAPRE3Q9UPY8 281 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 ABCA4P78363 2273 aa16.81■□□□□ 0.28
CLN6-220ENST00000637450 PRAMEF25A6NGN4 478 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 TUBAL3A6NHL2 446 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 OR6C70A6NIJ9 312 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 BCAS2O75934 225 aaPredicted RBP16.8■□□□□ 0.28
CLN6-220ENST00000637450 SUPT7LO94864 414 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 KRT6AP02538 564 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 KRT6BP04259 564 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 EPXP11678 715 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 CYP4B1P13584 511 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 DRD2P14416 443 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 CHN1P15882 459 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 TAC1P20366 129 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 TACR1P25103 407 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 GCKP35557 465 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 SLCO1A2P46721 670 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 KRT6CP48668 564 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 CSTF3Q12996 717 aaKnown RBP16.8■□□□□ 0.28
CLN6-220ENST00000637450 GLE1Q53GS7 698 aaKnown RBP16.8■□□□□ 0.28
CLN6-220ENST00000637450 ZNF628Q5EBL2 1059 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 LGSNQ5TDP6 509 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 ADGRE4PQ86SQ3 457 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 TGIF2LYQ8IUE0 185 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 CHDHQ8NE62 594 aaPredicted RBP16.8■□□□□ 0.28
CLN6-220ENST00000637450 TMBIM1Q969X1 311 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 TMCO6Q96DC7 493 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 ERP27Q96DN0 273 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 COL21A1Q96P44 957 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 ZNF382Q96SR6 550 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 TUBA1CQ9BQE3 449 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 TMEM216Q9P0N5 145 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 DLGAP4Q9Y2H0 992 aa16.8■□□□□ 0.28
CLN6-220ENST00000637450 HRNRQ86YZ3 2850 aaPredicted RBP16.8■□□□□ 0.28
CLN6-220ENST00000637450 DLX3O60479 287 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 ULK1O75385 1050 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 REM1O75628 298 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 ESRRBO95718 433 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 IL3P08700 152 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 DNASE1P24855 282 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 GCAP28676 217 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 GFRA1P56159 465 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 RAE1P78406 368 aaKnown RBP16.79■□□□□ 0.28
CLN6-220ENST00000637450 SORDQ00796 357 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 HMGCS1Q01581 520 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 CEBPEQ15744 281 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 TRIM42Q8IWZ5 723 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 GBP7Q8N8V2 638 aaPredicted RBP16.79■□□□□ 0.28
CLN6-220ENST00000637450 OR14L1PQ8NHC6 308 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 LINC01560Q8TB33 94 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 METTL6Q8TCB7 284 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 SLC35A4Q96G79 324 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 C16orf45Q96MC5 204 aaPredicted RBP16.79■□□□□ 0.28
CLN6-220ENST00000637450 BTBD9Q96Q07 612 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 UCN2Q96RP3 112 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 ACPTQ9BZG2 426 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 PFDN4Q9NQP4 134 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 PLEKHA6Q9Y2H5 1048 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 MED12Q93074 2177 aa16.79■□□□□ 0.28
CLN6-220ENST00000637450 EXOC1LA0A1B0GW35 172 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 EEF1E1-BLOC1S5C9J1V9 151 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 EEF1E1O43324 174 aaKnown RBP16.78■□□□□ 0.28
CLN6-220ENST00000637450 PCDH7O60245 1069 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 ABCB7O75027 752 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 RCBTB2O95199 551 aa16.78■□□□□ 0.28
CLN6-220ENST00000637450 TMIGD3P0DMS9 266 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms