RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RASL10BQ96S79 203 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 SLC35A5Q9BS91 424 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 PAIP1Q9H074 479 aaKnown RBP14.8□□□□□ -0.04
CLN6-216ENST00000636876 NXF5Q9H1B4 397 aaKnown RBP14.8□□□□□ -0.04
CLN6-216ENST00000636876 EPS8L2Q9H6S3 715 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 SLC6A13Q9NSD5 602 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 GPATCH2Q9NW75 528 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 STMN3Q9NZ72 180 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 ABI3Q9P2A4 366 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 GPR55Q9Y2T6 319 aaPredicted RBP14.8□□□□□ -0.04
CLN6-216ENST00000636876 NDUFAF1Q9Y375 327 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 ZNF451Q9Y4E5 1061 aa14.8□□□□□ -0.04
CLN6-216ENST00000636876 FRG2CA6NGY1 282 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 TTC36A6NLP5 189 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 ERVH48-1M5A8F1 160 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 NADKO95544 446 aaPredicted RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 ANP32DO95626 131 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 HMGN2P05204 90 aaKnown RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 CT45A8P0DMV1 189 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 CT45A9P0DMV2 189 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 HOXB9P17482 250 aaPredicted RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 CHI3L1P36222 383 aaPredicted RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 MAP3K8P41279 467 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 PRIM2P49643 509 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 SSR4P51571 173 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 CORO7P57737 925 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 CYLC2Q14093 348 aaPredicted RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 LASP1Q14847 261 aaKnown RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 ZNHIT3Q15649 155 aaPredicted RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 NNATQ16517 81 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 GTDC1Q4AE62 458 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 CT45A2Q5DJT8 189 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 LRIF1Q5T3J3 769 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 SAXO2Q658L1 398 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 ZCCHC12Q6PEW1 402 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 NPSR1Q6W5P4 371 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 C6orf120Q7Z4R8 191 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 WDR53Q7Z5U6 358 aaPredicted RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 DPP10Q8N608 796 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 SLC15A4Q8N697 577 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 EXD3Q8N9H8 876 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 CDRT4Q8N9R6 151 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 C9orf43Q8TAL5 461 aaPredicted RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 SLC22A8Q8TCC7 542 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 NEURL3Q96EH8 262 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 C16orf58Q96GQ5 468 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 LRRC37BQ96QE4 947 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 LMF2Q9BU23 707 aaKnown RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 RNF32Q9H0A6 362 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 ZBTB20Q9HC78 741 aaPredicted RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 RYDENQ9NUL5 291 aaKnown RBP14.79□□□□□ -0.04
CLN6-216ENST00000636876 TP53TG5Q9Y2B4 290 aa14.79□□□□□ -0.04
CLN6-216ENST00000636876 SPTA1P02549 2419 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 LOC100653049A0A140TA62 436 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 BBIP1A8MTZ0 92 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 CAPN14A8MX76 684 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 K7EM74 188 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 FBP2O00757 339 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 CDK2AP1O14519 115 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 TO15178 435 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 ACOX3O15254 700 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 ZNF354AO60765 605 aaPredicted RBP14.78□□□□□ -0.04
CLN6-216ENST00000636876 KRT34O76011 436 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 KCNH1O95259 989 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 WDPCPO95876 746 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 PDGFAP04085 211 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 KRT16P08779 473 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 ACP2P11117 423 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 COX4I1P13073 169 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 TRHRP34981 398 aaPredicted RBP14.78□□□□□ -0.04
CLN6-216ENST00000636876 PSG6Q00889 435 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 COQ5Q5HYK3 327 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 EXOSC6Q5RKV6 272 aaKnown RBP14.78□□□□□ -0.04
CLN6-216ENST00000636876 FAM91A1Q658Y4 838 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 CDC73Q6P1J9 531 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 SLC44A2Q8IWA5 706 aaPredicted RBP14.78□□□□□ -0.04
CLN6-216ENST00000636876 TAGAPQ8N103 731 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 POU5F2Q8N7G0 328 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 DNAJB8Q8NHS0 232 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 RP9Q8TA86 221 aaKnown RBP14.78□□□□□ -0.04
CLN6-216ENST00000636876 ZFP90Q8TF47 636 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 HSPBAP1Q96EW2 488 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 WBP1Q96G27 269 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 SLC35G5Q96KT7 338 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 YIPF4Q9BSR8 244 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 ACTRT3Q9BYD9 372 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 FAF1Q9UNN5 650 aaPredicted RBP14.78□□□□□ -0.04
CLN6-216ENST00000636876 PCDHB14Q9Y5E9 798 aa14.78□□□□□ -0.04
CLN6-216ENST00000636876 TNRC6AQ8NDV7 1962 aaKnown RBP14.78□□□□□ -0.04
CLN6-216ENST00000636876 TRBV5-3A0A0A0MS03 114 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 NKX2-2O95096 273 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 C1QCP02747 245 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 ALOX5P09917 674 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 PRDX6P30041 224 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 SOX3P41225 446 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 ST13P50502 369 aaKnown RBP14.77□□□□□ -0.05
CLN6-216ENST00000636876 HLCSP50747 726 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 NRG3P56975 720 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 PSPHP78330 225 aa14.77□□□□□ -0.05
CLN6-216ENST00000636876 STX5Q13190 355 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms