RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 GALNSP34059 522 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 MC3RP41968 323 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 CDKN2CP42773 168 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 NFYCQ13952 458 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 FXNQ16595 210 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 LRRC36Q1X8D7 754 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 PRICKLE4Q2TBC4 344 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 TRMT12Q53H54 448 aaKnown RBP13.46□□□□□ -0.25
LINC00339-208ENST00000634934 ZNF628Q5EBL2 1059 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 LCN8Q6JVE9 175 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 PPP4R4Q6NUP7 873 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 PAPD4Q6PIY7 484 aaKnown RBP13.46□□□□□ -0.25
LINC00339-208ENST00000634934 KIRREL2Q6UWL6 708 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 VWA5B2Q8N398 1253 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 HIPK4Q8NE63 616 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 OR14A16Q8NHC5 309 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 DAZLQ92904 295 aaKnown RBP13.46□□□□□ -0.25
LINC00339-208ENST00000634934 ELP4Q96EB1 424 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 LPAR4Q99677 370 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 ANKRD60Q9BZ19 345 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 OR8D2Q9GZM6 311 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 CXorf36Q9H7Y0 433 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 NEUROD4Q9HD90 331 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 VPS4AQ9UN37 437 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 ERVK-11Q9UQG0 969 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 ERVK-19Q9WJR5 959 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 URB1O60287 2271 aaKnown RBP13.46□□□□□ -0.26
LINC00339-208ENST00000634934 KMT2BQ9UMN6 2715 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-208ENST00000634934 LOC400499M0QZD8 3231 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 LOC102723996A0A087X1L8 192 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 CDC14CA4D256 554 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 SAGE2PA6NJ88 616 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 ZNF701M0R085 212 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-208ENST00000634934 HRKO00198 91 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 PEX12O00623 359 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 KCNH1O95259 989 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 COX6A1P12074 109 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 TRPC1P48995 793 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 MYBPC1Q00872 1141 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 MGAT2Q10469 447 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 MAP4K2Q12851 820 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 PCOLCEQ15113 449 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 B3GNT6Q6ZMB0 384 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 MRGPREQ86SM8 312 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 SPATA24Q86W54 205 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 CLEC4FQ8N1N0 589 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 OR7G2Q8NG99 324 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 OR11G2Q8NGC1 345 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 OR5AK3PQ8NH89 298 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 ZNF675Q8TD23 568 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 ADAMTS16Q8TE57 1224 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 SENP5Q96HI0 755 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-208ENST00000634934 VPS50Q96JG6 964 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 DPH1Q9BZG8 443 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 ANKRA2Q9H9E1 313 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 SIRT3Q9NTG7 399 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-208ENST00000634934 CCM2LQ9NUG4 571 aaPredicted RBP13.45□□□□□ -0.26
LINC00339-208ENST00000634934 DDX18Q9NVP1 670 aaKnown RBP13.45□□□□□ -0.26
LINC00339-208ENST00000634934 SLAMF8Q9P0V8 285 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 MAP10Q9P2G4 905 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 MAN2B2Q9Y2E5 1009 aa13.45□□□□□ -0.26
LINC00339-208ENST00000634934 A0A096LPI6 279 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 IGHV1-45A0A0A0MS14 117 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 NSG1A0A0A6YYJ2 146 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 NKX2-8O15522 239 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 HNRNPRO43390 633 aaKnown RBP13.44□□□□□ -0.26
LINC00339-208ENST00000634934 SLITRK5O94991 958 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 PRKAR1AP10644 381 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 FCGR1AP12314 374 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 ZNF23P17027 643 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 SSTR4P31391 388 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 CCT3P49368 545 aaKnown RBP13.44□□□□□ -0.26
LINC00339-208ENST00000634934 PRKAG1P54619 331 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 GAB1Q13480 694 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 ATP1A4Q13733 1029 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 EXOSC7Q15024 291 aaKnown RBP13.44□□□□□ -0.26
LINC00339-208ENST00000634934 GTDC1Q4AE62 458 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 ATP1A1-AS1Q5TC04 95 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 NDUFAF7Q7L592 441 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 SPACA3Q8IXA5 215 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 DPP10Q8N608 796 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 TRIML2Q8N7C3 387 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 GOT1L1Q8NHS2 421 aaPredicted RBP13.44□□□□□ -0.26
LINC00339-208ENST00000634934 PSMA8Q8TAA3 256 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 SLC2A12Q8TD20 617 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 NACC2Q96BF6 587 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 CRELD1Q96HD1 420 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 CCNL2Q96S94 520 aaPredicted RBP13.44□□□□□ -0.26
LINC00339-208ENST00000634934 WDR77Q9BQA1 342 aaPredicted RBP13.44□□□□□ -0.26
LINC00339-208ENST00000634934 PAIP1Q9H074 479 aaKnown RBP13.44□□□□□ -0.26
LINC00339-208ENST00000634934 ZNF700Q9H0M5 742 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 C3orf14Q9HBI5 128 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 TIMMDC1Q9NPL8 285 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 SLC6A13Q9NSD5 602 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 PNPLA3Q9NST1 481 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 ZCCHC3Q9NUD5 404 aaKnown RBP13.44□□□□□ -0.26
LINC00339-208ENST00000634934 GID8Q9NWU2 228 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 P4HTMQ9NXG6 502 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 PTGFRNQ9P2B2 879 aa13.44□□□□□ -0.26
LINC00339-208ENST00000634934 FBXL4Q9UKA2 621 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms